NONHSAT070138
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070138 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
662 nt |
Genomic location |
chr2-:37908256..37956510 |
Exon number |
4 |
Exons |
37908256..37908525,37909580..37909685,37945761..37945925,37956390..37956510 |
Genome context |
|
Sequence |
000001 GATCCTTGTC AACTTGATCC CAACTACCTT TCTATATATA TATATATATA TATATATATA TACACATATA TATATTTCTT 000080
000081 TATATGTATA TATATATTAC TTTAAATTCT AGGGTACATG TGGACACTGT CCACTTCTTA TCAACAGCGT TTCCTTCTTG 000160 000161 GGTATTACCA GTGATAATAG CTCAGGCTCG CCTTTTTCTC TGGCACTCAC AGGAATTTCT GTTGACACCA GGGTGCTGGT 000240 000241 GGAGAACATA TCTCCAGAGA GCTCAAAGGG AAGGTTTGCA GATCCAAAGA TCACAGGGCT AGCTGATGGA CAGCAGGGGT 000320 000321 CTGAATCCGG GTGCCTGACA CCAGAGCATG TACTTTTCAT TTGGATTCCA TGAGACTCCC GCAGACATAA CTCACCAGTC 000400 000401 ACATTGGATC ACGGTCCACC TATCTGACCT CATTTAACCT TGAATCTCTT TAAAGGCCGT ATCTCCAAAT ACAGTCATTT 000480 000481 TAAGGTACTG GTAGTTAGGA CTTCAACATA TGAATTTGCT GGGGGAGACA CAGCCCATGC AGTGTTGGAA TCCTACCCAT 000560 000561 CCACATCCCT CCTCAGATGC ACTTCCCTTC AGGAAGCATG AAACTCAGCC AGCTGGAATT TCTCCTTCCT TGAGACCCCA 000640 000641 TTTCTCCACT CCACCACTTA AC |
Predicted Small Protein
Name | NONHSAT070138_smProtein_83:301 |
Length | 73 |
Molecular weight | 8575.8416 |
Aromaticity | 0.152777777778 |
Instability index | 52.7805555556 |
Isoelectric point | 9.77020263672 |
Runs | 11 |
Runs residual | 0.0118613138686 |
Runs probability | 0.0334425334426 |
Amino acid sequence | MYIYITLNSRVHVDTVHFLSTAFPSWVLPVIIAQARLFLWHSQEFLLTPGCWWRTYLQRA QREGLQIQRSQG |
Secondary structure | LEEEEEELLEEEEEEEEEELLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHH HHHLLLEELLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLL |
PiMo | ooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiii iiiiiiiiiiii |