NONHSAT070191
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070191 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
544 nt |
Genomic location |
chr2-:38808957..38812889 |
Exon number |
3 |
Exons |
38808957..38809310,38810983..38811068,38812786..38812889 |
Genome context |
|
Sequence |
000001 CTACAAGCAA AAGGATCACT CGGCCAGGAA ATACTGATGA TCCATCAGGA GGCAACAAAG TTCTTCTGCT CTCAATTCAG 000080
000081 AATCCGCTTT ATCCAATTAC AGTGGATGTT TTATATACTG TATGCAACCC TGTTGGCAAA GTGCAACGTA TTGTTATATT 000160 000161 CAAGAGAAAT GGGATACAAG CAATGGTTGA GTTTGAATCA GTCCTTTGTG CCCAGAAAGC TAAAGCAGCA CTCAATGGAG 000240 000241 CTGATATATA TGCTGGATGT TGCACACTAA AAATTGAATA TGCACGGGTA AATATTTTTT TCAACACCCT ACCCAAGAAA 000320 000321 TATTTATGCT TTGGATATGC AGTTTGAACT TACATTATTT TCAATCTTAA CAGCCAACTC GTCTAAATGT TATTAGGAAT 000400 000401 GACAATGACA GTTGGGACTA CACTAAACCA TATTTGGGAA GACGAGGTAG GTATTTTATA CATTTTAGAA TGTACTTGAT 000480 000481 CTGCTGACAA ATTTTTATAT GCAGTTAGAT TCTTTTTTCC TGAGATGAGC TAGTTAATTC AAAT |
Predicted Small Protein
Name | NONHSAT070191_smProtein_182:346 |
Length | 55 |
Molecular weight | 6001.0467 |
Aromaticity | 0.148148148148 |
Instability index | 40.1981481481 |
Isoelectric point | 8.40716552734 |
Runs | 13 |
Runs residual | 0.0780487804878 |
Runs probability | 0.0232223173399 |
Amino acid sequence | MVEFESVLCAQKAKAALNGADIYAGCCTLKIEYARVNIFFNTLPKKYLCFGYAV |
Secondary structure | LLLHHHHHHHHHHHHHHLLLLEELLEEEEEEEEELLEEEELLLLLLEEEELEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiii |