NONHSAT070209
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070209 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
659 nt |
Genomic location |
chr2+:39185051..39201084 |
Exon number |
3 |
Exons |
39185051..39185339,39193147..39193286,39200855..39201084 |
Genome context |
|
Sequence |
000001 GGAGATAGAG ACCTTCACAG CAAACTTTAT CTGAGACATC TCTCTATCTT TTTTGGCATA ATATGTGTTC AGAGAGCCAG 000080
000081 TTTGCCACTG TACAACCTGA GAACTGTTAT TTCCATTCTG TTAGGTCATC CATGGCGAAG CTGTACAAAG GGCTGGCTTC 000160 000161 CCAGTGTGCC AATGCTGGGC AAGATGCTTC CCCCACTGCA GGTCCTGAGG CTGTCCGTGA CACTGGGATC CACTCAGAAG 000240 000241 AGTTGCTGCA ACCCTACCCT TCTGCTCCCA GTTCTGGCCC TGCCATCACG AGATGCATTT AGAAGATACT ACCAGATTCT 000320 000321 GTCCCAAAGA AGAAAGAGAA AGTGAACAAA CATCTTTCAG CGATCAAAAT CCCAGGCAAG ACCAGAAGGG GGGCTTTCGC 000400 000401 AGCTCCTTCC GCAAGCTCTT TAAAAAGAAG TCCAGTGGAT CAGAATACAG GGAAAAAACT AATGAGAATC CCTCAATGGA 000480 000481 TCCTTCACCC ACCAAACAAG ATTTCTTCAG AAACCGACTT GCTCTTGCAA ATGACCTTGA CCAAGGAACA GCTGTGTAAA 000560 000561 ACATACTTAA AGTTGTATTG TCAAGTGGTA AGATGAGGAT AAAAAGCTTG TATATATCTG TGTAGGAata tatatatata 000640 000641 tctatatcta tatatatat |
Predicted Small Protein
Name | NONHSAT070209_smProtein_62:301 |
Length | 80 |
Molecular weight | 8348.2264 |
Aromaticity | 0.0632911392405 |
Instability index | 63.9936708861 |
Isoelectric point | 5.47943115234 |
Runs | 10 |
Runs residual | 0.013698630137 |
Runs probability | 0.0414767708887 |
Amino acid sequence | MCSESQFATVQPENCYFHSVRSSMAKLYKGLASQCANAGQDASPTAGPEAVRDTGIHSEE LLQPYPSAPSSGPAITRCI |
Secondary structure | LLLLLEEEEELLLLLEEEEHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLHH HHLLLLLLLLLLLLLLEEL |
PRMN | - |
PiMo | - |