NONHSAT070319
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070319 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
603 nt |
Genomic location |
chr2-:42446314..42505732 |
Exon number |
4 |
Exons |
42446314..42446518,42494343..42494404,42496127..42496194,42505465..42505732 |
Genome context |
|
Sequence |
000001 TTTTTTTTTT TTTTTTTTTG AGATGGAGTC CCGCTCTGTC ACCCAGGCTG GAGTGCAGTC GCATGAGCTC GGCTCACCGC 000080
000081 AACCTCCGCC ACCCGGGTTT AAGTGATTCT CCCCACTCAG CCTCCCAAGT AGCTGGGATT ACAGGCATGC ACCATCACAA 000160 000161 CTGGCTCATT TTTGCATTTT TAGTAGACAT GTGGTTTCAC CACGTTGGCC AGATTGGTCT CAAACTTCCG ACTTCAAGTG 000240 000241 ATCCGCGCCC CCTCAGCCTC CCAAAGTGAA TGGTAAATAA CAATGAATCT AATCCTAGAG CAGGGAGGCA GCACAGTAAG 000320 000321 AGGAAGACTT GGATTTTGAG TGCAAGGTTT TACTGCCAAA TTCATATATT AATAACTAAA ACTTACCTGG TATTATATGG 000400 000401 GCATACTCAA GTCCCATAGT CAGCCCTGCA CAATCCACAT ATACAAAAAC TGAGGCCTCT GTATACACAG GTTTGGCATC 000480 000481 CCTGGAATAC TGTATTTTTC AATCCACGTT TGGTTGAAAA AATCCACATA TCAGTGGACC TGCCCAGTTC AAACTGGTGT 000560 000561 TGTTCAAGGG TCAACTGTAT TTCCTTATGA AGGGGGCTCT TCC |
Predicted Small Protein
Name | NONHSAT070319_smProtein_62:268 |
Length | 69 |
Molecular weight | 7557.5758 |
Aromaticity | 0.0735294117647 |
Instability index | 49.9352941176 |
Isoelectric point | 9.97711181641 |
Runs | 7 |
Runs residual | 0.037559618442 |
Runs probability | 0.0162389280036 |
Amino acid sequence | MSSAHRNLRHPGLSDSPHSASQVAGITGMHHHNWLIFAFLVDMWFHHVGQIGLKLPTSSD PRPLSLPK |
Secondary structure | LLLLLLLLLLLLLLLLLLLHHHHHHHHLHHHHHHHHHHHHHHHHHHHHLLEEEELLLLLL LLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL LLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiii iiiiiiii |