NONHSAT070414
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070414 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
560 nt |
Genomic location |
chr2-:44570944..44588952 |
Exon number |
3 |
Exons |
44570944..44571090,44573407..44573529,44588663..44588952 |
Genome context |
|
Sequence |
000001 ATTGCACCAT TCTTGCTGGT AGCCATCTTG AGTGAGGGCG GACCAGAGGA TGAGAGAGCT GTGGCAGGGC TACTGGAACG 000080
000081 CTGTCCCTCA TTGTTTTAGC CTTCTGTGCT TCATCTCGAG CTCAGAAGAC TAGCGAAGAA CGAAAAGTCT TATATATTTC 000160 000161 GAGACTAAAG AACCCAGGAA CCCAAGAAGA CTCCTTGACC ACAACAAAGA TGGCGAAATC TGCCTGTTGC TCGTGCTAGA 000240 000241 TTGAGGTTAC GTAGATTGGC GTGCTGCAAA CCAGCTCTAG GCGGCTCTGG GATCTTCAGC CTGTTAAACA AGAAAACGAA 000320 000321 AAACCCCTTC CAGAAAACAT GGATGCATTT GAAAAAGTGA GAACAAAATT AGAAACACAG CCACAAGAAG AATATGAAAT 000400 000401 CATCAATGTG GAACAGACAA TGATAATTAT GAAGTTTTAT TCAATTTGGA GGAACTTAAG TTAGACCAGC CCTTCATTGA 000480 000481 TTGTATCAGA GTTGCTCCAG ATGAAAAATA TGTGGCTGCC AAGATAAGAA CTGAAGATTC TGAAGCATCT ACCTGTGTAA 000560 |
Predicted Small Protein
Name | NONHSAT070414_smProtein_338:463 |
Length | 42 |
Molecular weight | 5053.7843 |
Aromaticity | 0.121951219512 |
Instability index | 44.3368292683 |
Isoelectric point | 4.81512451172 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0302066772656 |
Amino acid sequence | MDAFEKVRTKLETQPQEEYEIINVEQTMIIMKFYSIWRNLS |
Secondary structure | LLHHHHHHHHLLLLLHHHHEEEHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |