NONHSAT070515
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070515 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
855 nt |
Genomic location |
chr2-:46808424..46815761 |
Exon number |
2 |
Exons |
46808424..46808730,46815214..46815761 |
Genome context |
|
Sequence |
000001 ATGAGGTTTT TAAACTCACG TTTTATTAAT GGGTAGGCAG Gtaacatgat gattaggagt tctggcatca gattactggg 000080
000081 ttgaaatcct ggctttgtca cttgctagtg aggatgaaat aataaaatcc ctctaaaata cctagctcag cacctgacac 000160 000161 atggttatta cttaattaat gttaCAGGCA TTTGTGACCT AGAAAAGACA TAGTTTAATG ACTATATTTT TAGCCTTCAA 000240 000241 AAAATGCAAA TTCCATGATT TATTTGAGTT CTCATATATT AGAGAATATG TTAATTGTCT CAGTTTGTTG TTTTATTTTT 000320 000321 TCTGCCCAGC AGTCTTTCAG TTGGTAGAGT GGACTGTTAA TTTATCTATT TCTCTGGTAT TTAGTTATGC CAATTTAGGG 000400 000401 TATTTGGATT TCACATAATT TTCAATCCTG TCTGACATTT CAGATGACAG TAGAAAGAAA ACGtagcact tatagatctc 000480 000481 tccatgtacc ctgcaggggg cttggtactg tgaaatgagt aacttaatcc tgacaaccgt agtgcaagGT ATGGCCCATC 000560 000561 TCCTGTACGC TTGGAGCGAC CTTTGGCTAC GTGGCTGGCC TTGTTATTTC ACCACTCTGG ATATACTGGA ATAGAAAGCA 000640 000641 ACTTACATAC AAGAACAATT AACTGGAGCA AAGGGAGATA TTTCTTTGTG CAGATTCTGT AAGGGCTGGG CAGAAATGTG 000720 000721 TATGGTCAAA GCCAAGCAGT TCCATTTACA GCTCTGTTTT TTACGTAGTT ACAACATGAT GTGATTGTAG CTTTTTAAAC 000800 000801 TATGAAACCC CTGAGAGATT GTACCTTCTA GTTGAAATAA AGTATTTATA ATAGA |
Predicted Small Protein
Name | NONHSAT070515_smProtein_254:346 |
Length | 31 |
Molecular weight | 3498.1188 |
Aromaticity | 0.166666666667 |
Instability index | 55.39 |
Isoelectric point | 5.22210693359 |
Runs | 4 |
Runs residual | 0.0689189189189 |
Runs probability | 0.0 |
Amino acid sequence | MIYLSSHILENMLIVSVCCFIFSAQQSFSW |
Secondary structure | LEEHHHHHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | oooooTTTTTTTTTTTTTTTTTTiiiiiii |