NONHSAT070529
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070529 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1247 nt |
Genomic location |
chr2+:47055003..47086146 |
Exon number |
3 |
Exons |
47055003..47055223,47083062..47083129,47085225..47086146 |
Genome context |
|
Sequence |
000001 GGGGGGGGGG GACATAAGTG TGAGTGACTC CTTACTGCCG TCCAGGCAGC CTGGGGGCTA CGAGGGGCTT CAGAGGTCCT 000080
000081 CATCCCCAGC CTGTAGGCCT GGCCATACTG GACCCATGAG ATCAGCCACC CTGTCAGCTG GTACCTCGGG GTCCTACAGT 000160 000161 CCTCCTCGCT CAAGCCCTGG TCCTCTAACT CGGAGGTGAT GAGGTGTTGG GCTGGAAGAG ACAGGCAGCC AGATGATTCC 000240 000241 AATGTACAGC CAATGATGAG CAGCTGCTGG GCTGAAGGGA CTGGGGCCAT TTTATACCAG GATGTTACAC AGAAATGCCT 000320 000321 GAAAAGCAAG GAGCAGCTAT CAGAATGTTT GGTGACACAG CTCCTCCTGT CGTGGTTCCT TCGGCATGGA CTTCACATTC 000400 000401 AGCAGATCCA TGAGGTGTTC CCTTTCGGAT GAGCTCCAAG GTCTTAAGAG AGCATCTCTA GTCTGCGTGA GTCTGTCTGA 000480 000481 ACGACGGTCT TGAGCAAGAA CCACCTATAA CCATCTGCTC AAAATAACTC AGGGGAAGTC AAAGCTTTCT ATGTGGAAGG 000560 000561 TGACTGAAAC CACATACACA GACCACTGCA GCATTCCTGA CATTATGGAA CTTGGAAATG ATTCCAAACA TGGCCATAGC 000640 000641 TTGAGTAACA TGTTTTGCTA TGACAAGAAC TTGGACTGTA GTCCTTCCCC CTCTCAAGAA TGTGACATCA CACCTTATCA 000720 000721 GATCCTACGA GTGAGCTACT GACCTCAACC ACTGAACTTC AAACTATGTA AAAACCTAAG GGTTCGACAG ACACTTTGAG 000800 000801 AGCTTGGGCT GTGGCAAGCT ACACTCTGTC AGCCTCTCTT CGACAGGGCC CCACCCTGCT AGCCTTTGAA CTTGGAAGCA 000880 000881 TCGCCCACAA ACACCAGTGC CACCCTCTAG CCTTGAGGGA CCATATATGT CTCTGTGAAT CTCCGTTGCA TTGGACAGCT 000960 000961 TCTCTCCCAA GAGCTGCTCT TATAAAAGAG ACACACCACA TTTTAATGAG GCTTCGCTCT CCAGAGAGGT CTGCTTCCAT 001040 001041 CCTAATTGAG CAAGTAGACT TTAGTAACTT TGGAACTCAC TCACCCCGTG ACTAATACAC CCTGTCTACC CAGCGCATTC 001120 001121 CCTGTGAGAT TTGTTCATGT TGTTCTCCCC CTCCTTAAGC ATTGTGAACC TAGGAAAAAT ATCATCTTTG TAGGGCAATA 001200 001201 AACCATGTGA TTTGTGAAAA CAAAAAAAAA AAAAAAAAAA AAAAAAA |
Predicted Small Protein
Name | NONHSAT070529_smProtein_314:412 |
Length | 33 |
Molecular weight | 3351.7647 |
Aromaticity | 0.0625 |
Instability index | 51.63125 |
Isoelectric point | 5.36260986328 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0475711005123 |
Amino acid sequence | MPEKQGAAIRMFGDTAPPVVVPSAWTSHSADP |
Secondary structure | LLHHHHHHHHHHLLLLLLEEELLLLLLLLLLL |
PRMN | - |
PiMo | - |