NONHSAT070532
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070532 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
803 nt |
Genomic location |
chr2+:47082827..47085718 |
Exon number |
2 |
Exons |
47082827..47083129,47085219..47085718 |
Genome context |
|
Sequence |
000001 AAGAATCAGC CCCTGAGGTC TCCAGGAAGT ACCTTGATTT GAAAGAGCTG TGACCAACCT CAGTGGCATG TCCAACTACC 000080
000081 ACGCTGCAGA AGTCTGTGAG GCCGTGGTCC TCAGCCCTTT GCACAGATTa aaaccccaat cccagccgca ccccagacca 000160 000161 atcaatcagg atctctggag atggggccca ggcatctata tatatgtata tatatatatt tttttaattc ctcagatgat 000240 000241 tccaatgtac agccaatgat gagCAGCTGC TGGGCTGAAG GGACTGGGGC CATTTTATAC CAGTTGTAGG ATGTTACACA 000320 000321 GAAATGCCTG AAAAGCAAGG AGCAGCTATC AGAATGTTTG GTGACACAGC TCCTCCTGTC GTGGTTCCTT CGGCATGGAC 000400 000401 TTCACATTCA GCAGATCCAT GAGGTGTTCC CTTTCGGATG AGCTCCAAGG TCTTAAGAGA GCATCTCTAG TCTGCGTGAG 000480 000481 TCCGTCTGAA CGACGGTCCT GAGCAAGAAC CACCTATAAC CATCTGCTCA AAATAACTCA GGGGAAGTCA AAGCTTTCTA 000560 000561 TGTGGAAGGT GACTGAAACC ACATACACAG ACCACTGCAG CATTCCTGAC ATTATGGAAC TTGGAAATGA TTCCAAACAT 000640 000641 GGCCATAGCT TGAGTAACAT GTTTTGCTAT GACAAGAACT TGGACTGTAG TCCTTCCCCC TCTCAAGAAT GTGACATCAC 000720 000721 ACCTTATCAG ATCCTACGAG TGAGCTACTG ACCTCAACCA CTGAACTTCA AACTATGTAA AAACCTAAGG GTTCGACAGA 000800 000801 CAC |
Predicted Small Protein
Name | NONHSAT070532_smProtein_323:421 |
Length | 33 |
Molecular weight | 3351.7647 |
Aromaticity | 0.0625 |
Instability index | 51.63125 |
Isoelectric point | 5.36260986328 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0475711005123 |
Amino acid sequence | MPEKQGAAIRMFGDTAPPVVVPSAWTSHSADP |
Secondary structure | LLHHHHHHHHHHLLLLLLEEELLLLLLLLLLL |
PRMN | - |
PiMo | - |