NONHSAT070579
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT070579 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1466 nt |
Genomic location |
chr2-:47739991..47746533 |
Exon number |
4 |
Exons |
47739991..47740615,47745088..47745178,47745241..47745509,47746053..47746533 |
Genome context |
|
Sequence |
000001 AAAGCACCGC CTCACCGCCT CCAGCTGGAG CCATGCTGTG AAATCTCTCT CCCTGGCAAA TGTGCGTGGA ACACACACAC 000080
000081 ACACAAACAT GCACGCATGC GCTCACGCAC CCAGCATTAG AGTCAAACTT GAATGTCAAA CTCTTCTTTC CCCTTCTAGT 000160 000161 TCATGGCAGG AAGGGAAAGC TTACCTGAGA TCTCAGTGAC TCTCCAGCTA TTTTGGGTAA TTTCTGATTT GAGTTGGGAT 000240 000241 TGGTTTTTAA ACACAGGCCC TAATCTGGGG TGAAGCCAGT GAAGCAGCGC TGGCCAGGAG AGACGTCAGT CTTGCTAAAT 000320 000321 CCTGAAGGTG GGTTCCTGTG AAAACCATGC TTTCAGGATT CACTGTGACT GTCAGGCCAG CCCAGTGAGT GCCCCCCATC 000400 000401 CAACCCATGG TTGCGGTCAC AGTGAAGGGA TTGCCCACGC AGGGGCGCAC GTGTTCTCTA GGGCAGGGCC CTCTGACAGG 000480 000481 AGAAAATGAG ACCCTTCCTC TTCCCACCTC CCAACTTCCC AGAGAAACGC CAGTCCTCCA AGGTACAATG GCAGCTCAGG 000560 000561 ATCCAGTGGC ACATGTGTAT TTTTGCCTAT GTTCCCCTGT CCCCATCCCC CAATCCAGTC TCAGTCACAC TGCCATGATA 000640 000641 CATCACACCA TCATCCTTCA TCTCAGGCCA AAGGGCTCAG CGCCCCAGAC GACAGGGACT GCTTCCCTGA AGCAGGGATG 000720 000721 TGGTTCTCCC ATCATTTCAG GAACAGTGAC ATTCCCTCAG ATGCTGTGGC CTCTCTCACT GTCTTGGGGG TCTCCAGTTT 000800 000801 GCACACCACT GGTAGCTCAC TGTAGCCTAC AATTTCCTCA TAAGGGACAG GAGGAAGAAG AAAAAAGACT AAGGAAAGAG 000880 000881 GGTCAGAGAT ATGGGAGAAA ACCAAGAGCA CAGGATGCCA CAAAGCCAAG GGAAACAAGG GTTTCAAGAA GGAATAAGTG 000960 000961 CCAAGTGCCA CTGAGTGATT AAGACAAGGA CTGAAGAAAA CACCCACAAG ATTTAGCAAA GGGAAATATC AGTGACCTTG 001040 001041 GCAGAAGCAG CCGCAGGGGA GTGTGAGCTT CTTTGGAACT GGTGCTGCCT GGCTAATTTT CATGGGTCAC ACATTAGGGA 001120 001121 TACAAGTTAG GATACAGATT CAAGCCACTC TAACAGAGGT TCAAAATAAT ACTGGCTTCC GTTGGTAAAA GTTCATGTCT 001200 001201 CTCTCTTAAG AGTGAGTGCA AGCATAATCT ATGTAGTATC AGACACTTCT ATCTGTACCT ATCACTTGTG TTCCCTTGCC 001280 001281 ACTGGCCAGA ACTTTGTCAC ATGACCTAAT ATAGCTGCAA GATAATCAGG AAAAGTGGCC ATGAACCAAG CAAGGCTGGT 001360 001361 ACTCCCAAGA AGAGTGTTGT TCATCTCATG TTCAGGCCAC TGAGGGGACA TTATGCAGCT GCAGTGGGAC CTCTGAGGGG 001440 001441 TGACAATGAG GGTAGTATGA TAGCTA |
Predicted Small Protein
Name | NONHSAT070579_smProtein_485:637 |
Length | 51 |
Molecular weight | 5893.9053 |
Aromaticity | 0.14 |
Instability index | 92.486 |
Isoelectric point | 10.2949829102 |
Runs | 6 |
Runs residual | 0.0446783625731 |
Runs probability | 0.0324883707237 |
Amino acid sequence | MRPFLFPPPNFPEKRQSSKVQWQLRIQWHMCIFAYVPLSPSPNPVSVTLP |
Secondary structure | LLLLLLLLLLLLLLLLLLHHHHHHHHHHEEEEEEEELLLLLLLLEEELLL |
PRMN | - |
PiMo | - |