NONHSAT070594
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070594 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
634 nt |
Genomic location |
chr2-:47958541..47959174 |
Exon number |
1 |
Exons |
47958541..47959174 |
Genome context |
|
Sequence |
000001 GGCCAAGAAC AAATTAAGAG GGCAGAAATC CAGGAATGTA TTTCACATAG CCAGCGAAAA AAAACTTTGG GGCTAAAAAC 000080
000081 AAAGCAAAAC CAGTTACCAC TAATCttgtt tttttttttt tttttttttt ttgttttttt tgagacagag tttcactctt 000160 000161 gtcacccagg ctggagtgta tggagtgcaa tggcgcaatc ttggctcacc gcaacctctg cctcccgggt tcaagcgatt 000240 000241 ctcctgcctc agccttcttt gtagctggga ttataggcac ctgccataat gcctggctaa tttttgtatt tttagtagag 000320 000321 atgggatttc accaggttgg ccagcctggt cttgaactcc tgacctcagg tgacccacct gccttggcct cccaaagtgc 000400 000401 taggattaca ggcgtgagcc accatgcccg accACCACTA ATCTTAAGAA GATAAACATT ATGAATGATG AAAAAGCTAA 000480 000481 CAGAGTAAAT AAAGCTTTTG TAAATGTACA AAAGGAACTT GCACATTTCT CAAAAGGCCT TTCTCTTGAA CATCTACAGA 000560 000561 AAGAATTGAT TCCTCTGCAG TGTCATGAAA GCAAACCAGT TAATGTTGGT GAAGCTACAA AATTAATGGC TCAG |
Predicted Small Protein
Name | NONHSAT070594_smProtein_179:454 |
Length | 92 |
Molecular weight | 9646.0635 |
Aromaticity | 0.0659340659341 |
Instability index | 61.1197802198 |
Isoelectric point | 6.94903564453 |
Runs | 15 |
Runs residual | 0.0313644688645 |
Runs probability | 0.0372843431667 |
Amino acid sequence | MECNGAILAHRNLCLPGSSDSPASAFFVAGIIGTCHNAWLIFVFLVEMGFHQVGQPGLEL LTSGDPPALASQSARITGVSHHARPPLILRR |
Secondary structure | LLLLHHHHHHHLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLEEELLLLEEE ELLLLLHHHHLLLLEEELLLLLLLLLLLEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiii iiiiiiiiiiiiiiiiiiiiiiiiiiiiiii |