NONHSAT070697
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070697 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
overlapping(AS),sense |
Length |
556 nt |
Genomic location |
chr2-:53978052..54087057 |
Exon number |
5 |
Exons |
53978052..53978078,53990619..53990743,53992514..53992722,54047280..54047381,54086965..54087057 |
Genome context |
|
Sequence |
000001 GATGCCTCTA GTCCTGCATC ATCCAGAGCG GCAGGCGGAG CTGGGGTCCG GACTGCGAGA TGGAGGAGGG GCGGCGCTGC 000080
000081 GGCCACCCGG CAGGAGACAG ACGCAATAAA AGGAAGTTAA CAtactggta tcaagtattg gacaagactt tttacacaca 000160 000161 gtaaaattca ttcactgata caaccatttt atgaaACTGG TCAAACAAAT GGATTTTACA GAGGCTTACG CGGACACGTG 000240 000241 CTCTACAGTT GGACTTGCTG CCAGGGAAGG CAATGTTAAA GTCTTAAGGA AACTGCTCAA AAAGGGCCGA AGTGTCGATG 000320 000321 TTGCTGATAA CAGGGGATGG ATGCCAATTC ATGAAGCAGC TTATCACAAC TCTGTAGAAT GTTTGCAAAT GTTAATTAAT 000400 000401 GCAGttgtcc tgccatatcc acagggaatt ggtcccaaaa tgtccacgga caccaaaatt catggatgct cctcaagttc 000480 000481 ggcagtctgc cctgaagata ggaaaacgtc ctatacacac atacaaaagA TTCATCTGAA AACTACATTA AGATGA |
Predicted Small Protein
Name | NONHSAT070697_smProtein_398:538 |
Length | 47 |
Molecular weight | 5457.5215 |
Aromaticity | 0.0652173913043 |
Instability index | 75.6282608696 |
Isoelectric point | 10.6229858398 |
Runs | 6 |
Runs residual | 0.0309265010352 |
Runs probability | 0.0365954189483 |
Amino acid sequence | MQLSCHIHRELVPKCPRTPKFMDAPQVRQSALKIGKRPIHTYKRFI |
Secondary structure | LLLEEEEHHHHLLLLLLLLLLLLLHHHHHHHHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |