NONHSAT070792

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT070792

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2386 nt

Genomic location

chr2+:55705577..55712077

Exon number

2

Exons

55705577..55707573,55711689..55712077

Genome context

Sequence
000001 GTTTGGTTCA TGCAGATTCA TTATACTATT TCCTCTACTT TTGTGTATGT GTGAATTCTC CACAATAAAA AGGTGTTTTA 000080
000081 AATCCTAAAA AAACAAAAAT CTCTGAAACA GAGAGTGTAG TGAGTGTAGT TTAGGTCACA TGCTTACCCC TTGACTATGT 000160
000161 CAGAGGGTGA AGGAAGAAGC CTCTAGGGAC TCCTTTGGTT TCTGTAGTAG GAGAGCATTT GTATTTATCA TCCTGACAAT 000240
000241 GAGACACAAT GGGGGTGAGG TAATTCTCCC AAAAGACATT GGGGTGCAAT TAGGAAGAGG GATGGAGGCT GGGTGTCCAT 000320
000321 ATAATGACAA CTATCCACTT CTGTGCATGA CAGATGGGGC ACTTTATCAA CTTTCCTCCC TCATCTCTTA TCTCCTCCAC 000400
000401 TACAGCCTGC ACTCCAGCCG GGCCAGCAAC CTTGTGCCTT TCTGTGCCCT GCTCTTGACT GTGTTGGTGC CCTGATGAAA 000480
000481 GTCTACTCAT CCTGCAGACT CAATTCAGAC ATCATCTCCT TCGACTTTGT AAGCAGAAGG TGGTAGATTT TGGATGGCTC 000560
000561 TTGACTCTTC ATCTCACAGT GTATTTACAG TAGTGGTCCT GCATCAAAAT CAGCTGACAA ACTGGTTAAA ACACATATTG 000640
000641 CTGGGCCCAA CCCTTAGAGT TTCTGTTTCA GTAGGTCTTG GGTGGGGACC TGAAAATTTG CATTTTTAAG TTCCCAGATG 000720
000721 ATGCTGATGC TGCTGGTCCA GGGACTGCAT TTTATGAACC TCTGCTTTGG AACATTGGTG TCCAAATCTG ACTACGTACC 000800
000801 AGCCTCAAAT GTAGAATGTT AAAAGTATAT AACTTCCTGG ATTGGCTGTA GGCTTGAAGA ATCAGATACT CTGGGAGTGG 000880
000881 GATCCAGGAA CCTGCATTTT GAAATAGATT CCCAGCTGTT ATTTCTGCAG TGGTCCTGAC AATATTTTGG ATAGTTACTG 000960
000961 GGGACCACAG CATCTGAGGG CACTGATCAG TCAGACCACC TCCCCCCACC CTTTAGGCAA AGTGACAGAG AGGCTGGTGT 001040
001041 ATTTCTTCCT AACAGGATGG AAGCAGCCCT GAAGAAAATG ATGCTTTCTT ACTGGTTAAA GGATTATAGT GGGCCAGGCA 001120
001121 CAGTGGCTCA TGCCTGTAAT CCCAGCACTT TGGGAGTCTG AGGTGGGAGG ATAACTTGAG CCCAGGAGTT CACGACCAGC 001200
001201 CTGGGCAACA AGGTGAGACT CTGTCTCTAC AAATAATAAA AAAATGAGGT AGGTGTGGTG GCTCACGCCT ATAGCTACTT 001280
001281 GTGAGGCTGA GGTGGGAGGA TCACTTAAGC CAGAGTGGTC AGGCTGCAGT GAACCATGAT CGTACCACTG TACTCCAGCC 001360
001361 TGGGCAGTAT AGTAAGACCC TGCCCTGTCT CAAAAAAGAA TTACAGTGAA GATTAATATA ATCTCACACA AATATTCAGA 001440
001441 AAGTACCATT GTTAGTACTT TAAAATTTTT AATTGAAATC AGATGTCAAT TTCTACCTCT TAAATGAGCA AAGCATTGAA 001520
001521 ATAATTTAAT AGGTTAGAGA TAGTGGGTTG AAATGCATAC TCTCATTTAT TACTATTGGC ATTATAAACT GATACGCTGT 001600
001601 CTTCGAAAAG CAATTTGGCA ACCTACATCA AGATCCAGAA AATGGGCCAA GATCCAGAAA ATAGGCCAGG TGCAGTAGCT 001680
001681 CATGGCTGTA ATCCCAGAAC TTTGAGAGGC CAAGGTAGGA GAATCACTTG AGGCCAGGAG TTCAAGACCA GCCTGGGTAA 001760
001761 CATAGCAAGA CCCTATCTCT ACAAAAAATA AAAAATTAGC CCATGTGGTG GTGTGTGCCT GTAGTCCCAA CTACATGGGA 001840
001841 GGCTGAGGTG GGAAGTTCCC TTCAGCCCAG GAGATTGAAG TTGCAGTGTG CTATAATGGT GCCACTGCAC TCCAGGCTGG 001920
001921 GTGAGAGAGC AAGACTCTCT TTTATATATA TATATATATT ATATATATAT ATAATATATA TATATGGCCG GGCGAGGTAG 002000
002001 TCTCGAACTA GCCTTCTATA GTGAGCATGT AGTGCAAGTG AGTCACCGTG CCTGGCCTGT AATTTTTTTT TTTTTTTGAG 002080
002081 ATAGAGTTTT GTTCCTGTTG CCCACACTGG AATGCAATGG CATGATCTCG ACTCACTGCA ACCTCTGCCT CCTGGGTTCA 002160
002161 AGTGATTCTC CTGCCTCAGC CTACCGAGTT GCTGTGATTA CAGGCATGCG CCACCACGCC CGGCTAATTT TATATTTTTA 002240
002241 GTAGAGATGA GGTTTCTCCA TGTTGGTCAG GCTGGTCTCA AACTCCTGAC CTCAGGTGAT CTCCTGCCTC GGACTCCCAA 002320
002321 AGTGCTGGGA TTACAGATGT AAGCCACCAG CCTATAATCT TTAAAGAAAA AATAATTAGT GTTTTA
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Predicted Small Protein

Name NONHSAT070792_smProtein_1802:1999
Length 66
Molecular weight 7761.21
Aromaticity 0.153846153846
Instability index 40.2169230769
Isoelectric point 9.69134521484
Runs 13
Runs residual 0.0497115384615
Runs probability 0.0595369124782
Amino acid sequence MWWCVPVVPTTWEAEVGSSLQPRRLKLQCAIMVPLHSRLGERARLSFIYIYILYIYIIYI
YGRAR
Secondary structure LEEEELLLLLLLEEELLLLLLHHHHHLLEEEEELLLLLLLLLLEEEEEEHHHHHEEEEEE
EELLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHH
HHLLL
PiMo ooooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTT
TTiii