NONHSAT070803
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT070803 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1281 nt |
Genomic location |
chr2-:55863505..55874517 |
Exon number |
9 |
Exons |
55863505..55863527,55864687..55864734,55867762..55867840,55870293..55870348,55870454..55870560,55871772..55872567,55873394..55873457,55873550..55873621,55874482..55874517 |
Genome context |
|
Sequence |
000001 GAAATAGAAG ATTATCGTTT GCTGACAGAT ATTTTGGGAA TTGAAGATTA CAATGGTGAC ATGGACTTCA AAATAGCTGG 000080
000081 CACTAATAAA GGAATAACTG CATTACAGGC TGATATTAAA TTACCTGGAA TACCAATAAA AATTGTGATG GAGGCTATTC 000160 000161 AACAAGCTTC AGTGGCAAAA AAGGAGATAT TACAGATCAT GAACAAAACT ATTTCAAAAC CTCGAGCATC TAGAAAAGAA 000240 000241 AATGGACCTG TTGTAGGTAA TACATTAAAA TTTTAGTGAT Cggctgggcg cggtggctca cgcctgtaat cccagcactt 000320 000321 tgggaggccg aggcgagcgg atcacaaggt caggagatcg agaccatcct ggctaacacg gtgaaaccct gtctctacta 000400 000401 aaaaatacaa aaaattagcc gggcgtggtg gcgggcgcct gtagtcccag ctactcggga ggctgaggca ggagaatggc 000480 000481 atgaacccgg gaggcggagc ttgcagtgag ccgagatcgc gccactgcac tccagcctgg gcgacaaagt gagactccgt 000560 000561 ctcaaaaaaa aaaaaaaaaa aaTTTTAGTG ATCATGGTAA GATAAACATT AATATATGAA TGAATATTAC TGCTTTTAAA 000640 000641 TTGTTTTTAC CCAGTGCACA AAACGAAAAT ATTTTAAATA CTTTTGTAGT TAAAATGCTT TAAATTTTAG GGAATATTCT 000720 000721 TTAACAGTTT TCAGTAATTT TAATCATCTA CTTTTCTGTT TTATAGTAAA ATATTTTTAC ATGTGTCTAG GTCAAAAAAA 000800 000801 AAAAAAATCT CAAGTGACCA TGGCATGTTT TAGGTTCATG TATGTAGTTG AATTGTTTAT ATATTTGTCT GTATTACGTT 000880 000881 CCAGAAACTG TTCAGGTTCC ATTATCAAAA CGAGCAAAAT TTGTTGGACC TGGTGGCTAT AACTTAAAAA AACTTCAGGC 000960 000961 TGAAACAGGT GTAACTATTA GTCAGGTGGA TGAAGAAACG TTTTCTGTAT TTGCACCAAC ACCCAGTGCT ATGCATGAGG 001040 001041 CAAGAGACTT CATTACTGAA ATCTGCAAGG ATGATCAGGA GCAGCAATTA GAATTTGGAG CAGTATATAC CGCCACAATA 001120 001121 ACTGAAATCA GAGATACTGG TGTAATGGTA AAATTATATC CAAATATGAC TGCGGTACTG CTTCATAACA CACAACTTGA 001200 001201 TCAACGAAAG ATTAAACATC CTACTGCCCT AGGATTAGAA GTTGGCCAAG AAATTCAGGT GAAATACTTT GGACGTGACC 001280 001281 C |
Predicted Small Protein
Name | NONHSAT070803_smProtein_989:1090 |
Length | 34 |
Molecular weight | 4003.7893 |
Aromaticity | 0.0606060606061 |
Instability index | 60.3848484848 |
Isoelectric point | 11.0065307617 |
Runs | 5 |
Runs residual | 0.0326086956522 |
Runs probability | 0.011817700053 |
Amino acid sequence | MKKRFLYLHQHPVLCMRQETSLLKSARMIRSSN |
Secondary structure | LLLEEELLLLLLHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |