NONHSAT070805
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070805 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
713 nt |
Genomic location |
chr2-:56038389..56039814 |
Exon number |
2 |
Exons |
56038389..56038830,56039544..56039814 |
Genome context |
|
Sequence |
000001 aaatctgatc acctctccta gcctaccccc aaaagtattt tgatggcttc tcattgttct taggatttaa gaccaaaata 000080
000081 atctgtaaca tggcctttgt gcccctggat gacctggccc tgctgccctt cttcttactg tcccctgtgg ctggctcatc 000160 000161 ctcactctat tctagctgca ctggcctgtt ctctccatcc ctcctatccc ggagcttcag cacttggcca ctgcctctca 000240 000241 ggaactgctc accccaacct gcaacctcca aTTCAGTGGA ACTTATGAGG TTCAACTATA TTTGAGTTGG AGAATCTAAA 000320 000321 TGAACAAAAA GAGCTTACCT GATCCACCAA TCTGAAAAGT ATTTCTtcat ggaatcatgg tatcctaagg gaagaatgga 000400 000401 cctaagagag atcctaatcc atccccttTC ACACCTGCAA GTCCAAGTCA TTCCATGTCT CACTAGAGTT CCCTTGAGCT 000480 000481 GGGGCAATCT GTTCCATGTA CTTTAGGGGG ACTTGGAGCA AAACTTCATG ACAGTTCTGT GATAAAAGAG CAAAAGAAGG 000560 000561 TTGTGTCTTT CCCCAAAGGT CTAGAGAAAT TAGAAGAGAG GGTAGAGAAA GGGAGGGTAT GTGGAAACAG GAGTTGAGGA 000640 000641 ATGGATAATA GGAAAAAGAA CAACTAGGGA AAATAATAAA AATGGAAAAA AAACTTTTAA AAATTCTGGA AAC |
Predicted Small Protein
Name | NONHSAT070805_smProtein_89:304 |
Length | 72 |
Molecular weight | 7759.9042 |
Aromaticity | 0.12676056338 |
Instability index | 80.4704225352 |
Isoelectric point | 5.87176513672 |
Runs | 10 |
Runs residual | 0.00770941438102 |
Runs probability | 0.0305423070128 |
Amino acid sequence | MAFVPLDDLALLPFFLLSPVAGSSSLYSSCTGLFSPSLLSRSFSTWPLPLRNCSPQPATS NSVELMRFNYI |
Secondary structure | LLLLLLLLHHHLLHHHLLLLLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLHHHHHHEEL |
PRMN | - |
PiMo | - |