NONHSAT070842
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070842 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
859 nt |
Genomic location |
chr2+:57982563..57992345 |
Exon number |
2 |
Exons |
57982563..57982922,57991847..57992345 |
Genome context |
|
Sequence |
000001 GTAGAAATAA ACTGTCCATG AATTTAAATC AAAACTATTT ATAACACTTT GAGTGTTAGA GCATAAGAAG ATGAACTTTA 000080
000081 GGAAGTTAAG AGagtgattc ccaaattcag cgtgcatcag aatcacctgg aggacttgtt gaaacacaga atgctgagct 000160 000161 ccgcctcaag tttctgattc agtagttcag gggtaagggc caagaatttg catttctacc aggtgctcat gtaatgctga 000240 000241 tgctactttt ccaggaactg ctctttgaga atcTTCTAGT AGGATACAAA ACTTCATTCT TTAATGAAGA ATCCGAAAAA 000320 000321 CTGAGAGGCA AACAAAGGGA CTCACTCAAA ATGAGACAAG ATATGAAAAG CCTTCATAGA GGAAGAGGAT GAAGGGGCAG 000400 000401 CATAAAGAAG GAATAGTCAA GAATGTAAGA GAAGGAAATC AAGAACAGGA GTTGAGCCTT TCTCTATGCC TCTAAAACAA 000480 000481 GCCCAGCAGT GGGGCCCTGG TTATCTATCT AAAAGTTGTT GGAAGGAAAG CATAAGATAA TGATGTGGCT CACTCGCTGC 000560 000561 AAATGGTCTA CCCTCCACCT CCCAGCTCCT CCATTGATCT CACTGAAAGA AAAGATTGCT GGCTCGTCAA TGATAGTGGC 000640 000641 TCTGGCATGT GCAAAGCTGG CTTTGCTGGG GAAGACACCC CCTGAGCCAT GTTTCTCTCC ATCGTCAGGT GCCCCTGGCA 000720 000721 CCACAGTGTG ATAGTGGGCA TGGGCAAGAA GGACTCCTAC ATGGGTGACA AGACCCAGAG CAAGCCAGAT GCTGACCCTG 000800 000801 AAGTACCCCA TCCAGCACTG CATGGACACC AACTGGGGCA ACATGGAGAA GATCTAGTA |
Predicted Small Protein
Name | NONHSAT070842_smProtein_539:730 |
Length | 64 |
Molecular weight | 6606.926 |
Aromaticity | 0.047619047619 |
Instability index | 47.9920634921 |
Isoelectric point | 9.35443115234 |
Runs | 7 |
Runs residual | 0.0338516358925 |
Runs probability | 0.0253362606305 |
Amino acid sequence | MMWLTRCKWSTLHLPAPPLISLKEKIAGSSMIVALACAKLALLGKTPPEPCFSPSSGAPG TTV |
Secondary structure | LLLEEELLLLLLLLLLLLLLLHHHHHLLLHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL LLL |
PRMN | - |
PiMo | - |