NONHSAT070884
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070884 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
809 nt |
Genomic location |
chr2+:59998046..60019206 |
Exon number |
3 |
Exons |
59998046..59998112,60000099..60000179,60018546..60019206 |
Genome context |
|
Sequence |
000001 AAACCATAGA CTGGTATGTA TGGGCCACCA CTTGACCTTC ACCCACACAG CTCCTGAAAG TCAGAAGaac tgccctgtgg 000080
000081 aaagattcta acagttcact tccctgtcac tggataagca agcccttttg cacataccca tgaccatgCA CTTTGGATAA 000160 000161 GTGGAATGCA GCTGCACAAA AGCAAGATAA AGCTGGACCA TCAAGATGAT GAACAATCTG GATGAAGAGC CTTCGAGACG 000240 000241 CACACAAAAG CTGGAGAAGT GCAGTTGATG TAGGCCTGGA CAGCTGAAGA ATGCTGCGGT CTAACGATGA ATAGCCCTCA 000320 000321 TTTGTGAATA TACAGATTTT CCACGATGAA TAAAAACTGA GTGGAGGTCA CAATAAATAA ACTTTTTCCC CCCTTCTTCT 000400 000401 TAAATAATAA TTCAGGTTCC CGGCACCAAA CAGCTGTAAA TTGAAGGTTG TGCTTAGTTT TCTCAACTCT CAAAGGGGAT 000480 000481 AATTAAGCTA AGATCACATT GTTTGATATA TTAGTGTAAT GATGAGCTCC TATATTCTGC TTGTTTCGAG TTATTTTAGT 000560 000561 TTTTCTTTCC CATTATCTGT TTTTTTAATT ACATTTCAAA TACATTTTAA ATGTAGGAAC AGCAGTTCTG AAACAGAGTT 000640 000641 TGCCCTATGT TTGGATCTAT TTGAAATGTA TTCATATAAC ATTTAATTAA AGCAGCAACA TTCCCCTTTA GAAAATGTGT 000720 000721 GGAGGTAGAA ATATCTATAT TATCTGACTA GTTCTGACAT AATCTTGCCA AAAGGCTGAC TCTTTTTCCT TATTGGTGCA 000800 000801 AGATAATTA |
Predicted Small Protein
Name | NONHSAT070884_smProtein_518:685 |
Length | 56 |
Molecular weight | 6499.4802 |
Aromaticity | 0.218181818182 |
Instability index | 63.2072727273 |
Isoelectric point | 4.83099365234 |
Runs | 7 |
Runs residual | 0.0242424242424 |
Runs probability | 0.0397582456406 |
Amino acid sequence | MMSSYILLVSSYFSFSFPLSVFLITFQIHFKCRNSSSETEFALCLDLFEMYSYNI |
Secondary structure | LLEEEEEEEEEEEEELLLLLLEEEEEEEEEELLLLLLHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiii |