NONHSAT070942
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070942 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1971 nt |
Genomic location |
chr2+:61405803..61414047 |
Exon number |
5 |
Exons |
61405803..61406306,61408455..61408540,61411847..61411935,61412637..61413632,61413752..61414047 |
Genome context |
|
Sequence |
000001 CTGCTACTTT CCCTGTGGCC TAGGCTTTGC CTATTTCCAG TGGGCGAGCT AGCTAGATCC TCCTCCCTTA AATAAGCCAG 000080
000081 TGTTTTTAAG ACAGAATACT ACTTGCATAG TGGACAATAA TATCTTAAAG AACTGAGCAG GATGAAAAGA ATTTGATAGA 000160 000161 AAGCAGGTTT GAGGAGCACA TTGGAGGTTG GCAGGTTTCG AGGCTGCTTG AGAGGACTTG GGCCGATCTG GGCTGGGCTT 000240 000241 GGACGTGACC CTGGCACCCA GGCAGGTGGA TCCCAGCTGG GGCTTCCATT CACGACTTTC TGGTCCCTGG CAGGACAGAG 000320 000321 CGGGATGCCA CCAGCTTGTC CAAAGGGAAG TTCCAGGAGC TCCTGGTGGG CATCGTTGTG GAGAATGACG CTGGCCGCGG 000400 000401 CGAGATCAAC GAGTTGAAGC AGGTGGAAGG GGAGGCTTCG TGCAGCAGCC GCAAAGGAAA GCTGATTTTC TTCTATGAGT 000480 000481 GGAACATCAA ACTGGGCTGG AAAGGCATCG TTAAAGAATC TGGAGTGAAG CACAAGGGAT TGATTGAAAT ACCCAATCTT 000560 000561 TCTGAGGAAA ATGAAGTAGA TGACACTGAG AATTTACAAC GGGAATGATT TTACCAACGA AAGCTATGGC AACCCAGGAA 000640 000641 TTGACTGTCA AAAGAAAACT GAGTGGGAAT ACCCTGCAGG TTCAGGCCTC ATCTCCAGTG GCACTGGGTG TAAGGATTCC 000720 000721 CACTGTGGCT CTTCACATGA TGGAACTGTT TGACACAACT GTAGAGCAGC TGTATAGCAT CTTCACTGTA AAGGAGGTAA 000800 000801 GTAACTCCCT AAGCTAGCAT GTTAAGTGCT GACATTGGGA GAAAATACAT TACAAAGAAC AGGAGCTGGT TTTTGGTTTT 000880 000881 CCTTGTGGCT GTGTTTTTGA TTGAAGGGAT GTGGGATGGT GGTGACAGAA GTCTGAGCAT AGTTTCTGAA TAATTGGAGG 000960 000961 GGAGATGGGC ATTCTTTGGG ACTATGTCCG CATTACATTG AGTTTTCTCC CTCTAGGAAG AGAGAGTTTG TGTTTTATTT 001040 001041 TCTGTAAGTA AAAGCTACAT GTTTAGGATT TTTAAACCAT ATTAATTGTT ATATTTTGTA TTTCATAATT ATATTATGTG 001120 001121 TTAGTGTGTA CTGGAATAAC ATGTTTTATT TGGTTAGTTG GTGCAAAAGT TTTCTAAATC TACTGCTGTA TTAGAAACTG 001200 001201 AAAAGGGAGG GAAATTCCAG ATGTTTGATG GGAACATCAC TGGTGAATAT CTAGGATTGG TAAGTAGACT CAAGGTTGAA 001280 001281 GAAGTAAGGT GGGATTAACT CTTAATATTA CTTTTTGTAT ATGCTGTTTT TAGCACCGAA ATCACGAGGG TCTGTGTTGC 001360 001361 CTCAACCTTA ACAGCAGCCC TCTGTTCTGG TTACTATTAC TGTACTTAAA ACATTATTAT ATATTCCTGC TGTCCTTGAT 001440 001441 GTTACTGCTG TTCTGAGACA TTTTGGCAAT AAAGACAATT ATCAGTGGTG CTGATGTATA AACTGGAAGA AGGACCGTAT 001520 001521 GTTGTTCATT GATTCTTCTA GGAGTTTCAA TGAAAGGATT TTTCTGTGTT GTATTGTGGG AAGTCTTAAA AGATTTTCAG 001600 001601 TGGAATTTCC CCTCTCTTTT CAGTTAACAA ATAAGAAGAT CATCATGAAA TGGAGATGTG GGAACTGGCC AGAAGAACAC 001680 001681 TATGCCATGG TTGCACTGAA TTTTGTGCCT ACTCTAGGGC AAACAGAATT ACAATTGAAG GAGTTCCTAT CTATCTGTAA 001760 001761 AGAAGAGAAC ATGAAATTCT GTTGGCAGAA GCAGCATTTT GAAGAAATAA AAGGTTCACT GCAGCTGACC CCCCTAAATG 001840 001841 GTTGAATTAA AATTTATTAT AAGGCATTAC TTTTTGTAAG CGGAAAAAGT GTCACATTTA CCTCTTCCCT ATCTTTTGTT 001920 001921 TAAAAGGACT GTCTTTATTT TATATTGGAT GAAATCTATG AACATATATA C |
Predicted Small Protein
Name | NONHSAT070942_smProtein_818:952 |
Length | 45 |
Molecular weight | 5021.81 |
Aromaticity | 0.136363636364 |
Instability index | 41.3409090909 |
Isoelectric point | 6.10174560547 |
Runs | 9 |
Runs residual | 0.0414438502674 |
Runs probability | 0.033710180769 |
Amino acid sequence | MLSADIGRKYITKNRSWFLVFLVAVFLIEGMWDGGDRSLSIVSE |
Secondary structure | LLLLLLLLEEELLLLEEEHHHHHHHHHHHHEELLLLLEEEEEEL |
PRMN | - |
PiMo | - |