NONHSAT070942

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT070942

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1971 nt

Genomic location

chr2+:61405803..61414047

Exon number

5

Exons

61405803..61406306,61408455..61408540,61411847..61411935,61412637..61413632,61413752..61414047

Genome context

Sequence
000001 CTGCTACTTT CCCTGTGGCC TAGGCTTTGC CTATTTCCAG TGGGCGAGCT AGCTAGATCC TCCTCCCTTA AATAAGCCAG 000080
000081 TGTTTTTAAG ACAGAATACT ACTTGCATAG TGGACAATAA TATCTTAAAG AACTGAGCAG GATGAAAAGA ATTTGATAGA 000160
000161 AAGCAGGTTT GAGGAGCACA TTGGAGGTTG GCAGGTTTCG AGGCTGCTTG AGAGGACTTG GGCCGATCTG GGCTGGGCTT 000240
000241 GGACGTGACC CTGGCACCCA GGCAGGTGGA TCCCAGCTGG GGCTTCCATT CACGACTTTC TGGTCCCTGG CAGGACAGAG 000320
000321 CGGGATGCCA CCAGCTTGTC CAAAGGGAAG TTCCAGGAGC TCCTGGTGGG CATCGTTGTG GAGAATGACG CTGGCCGCGG 000400
000401 CGAGATCAAC GAGTTGAAGC AGGTGGAAGG GGAGGCTTCG TGCAGCAGCC GCAAAGGAAA GCTGATTTTC TTCTATGAGT 000480
000481 GGAACATCAA ACTGGGCTGG AAAGGCATCG TTAAAGAATC TGGAGTGAAG CACAAGGGAT TGATTGAAAT ACCCAATCTT 000560
000561 TCTGAGGAAA ATGAAGTAGA TGACACTGAG AATTTACAAC GGGAATGATT TTACCAACGA AAGCTATGGC AACCCAGGAA 000640
000641 TTGACTGTCA AAAGAAAACT GAGTGGGAAT ACCCTGCAGG TTCAGGCCTC ATCTCCAGTG GCACTGGGTG TAAGGATTCC 000720
000721 CACTGTGGCT CTTCACATGA TGGAACTGTT TGACACAACT GTAGAGCAGC TGTATAGCAT CTTCACTGTA AAGGAGGTAA 000800
000801 GTAACTCCCT AAGCTAGCAT GTTAAGTGCT GACATTGGGA GAAAATACAT TACAAAGAAC AGGAGCTGGT TTTTGGTTTT 000880
000881 CCTTGTGGCT GTGTTTTTGA TTGAAGGGAT GTGGGATGGT GGTGACAGAA GTCTGAGCAT AGTTTCTGAA TAATTGGAGG 000960
000961 GGAGATGGGC ATTCTTTGGG ACTATGTCCG CATTACATTG AGTTTTCTCC CTCTAGGAAG AGAGAGTTTG TGTTTTATTT 001040
001041 TCTGTAAGTA AAAGCTACAT GTTTAGGATT TTTAAACCAT ATTAATTGTT ATATTTTGTA TTTCATAATT ATATTATGTG 001120
001121 TTAGTGTGTA CTGGAATAAC ATGTTTTATT TGGTTAGTTG GTGCAAAAGT TTTCTAAATC TACTGCTGTA TTAGAAACTG 001200
001201 AAAAGGGAGG GAAATTCCAG ATGTTTGATG GGAACATCAC TGGTGAATAT CTAGGATTGG TAAGTAGACT CAAGGTTGAA 001280
001281 GAAGTAAGGT GGGATTAACT CTTAATATTA CTTTTTGTAT ATGCTGTTTT TAGCACCGAA ATCACGAGGG TCTGTGTTGC 001360
001361 CTCAACCTTA ACAGCAGCCC TCTGTTCTGG TTACTATTAC TGTACTTAAA ACATTATTAT ATATTCCTGC TGTCCTTGAT 001440
001441 GTTACTGCTG TTCTGAGACA TTTTGGCAAT AAAGACAATT ATCAGTGGTG CTGATGTATA AACTGGAAGA AGGACCGTAT 001520
001521 GTTGTTCATT GATTCTTCTA GGAGTTTCAA TGAAAGGATT TTTCTGTGTT GTATTGTGGG AAGTCTTAAA AGATTTTCAG 001600
001601 TGGAATTTCC CCTCTCTTTT CAGTTAACAA ATAAGAAGAT CATCATGAAA TGGAGATGTG GGAACTGGCC AGAAGAACAC 001680
001681 TATGCCATGG TTGCACTGAA TTTTGTGCCT ACTCTAGGGC AAACAGAATT ACAATTGAAG GAGTTCCTAT CTATCTGTAA 001760
001761 AGAAGAGAAC ATGAAATTCT GTTGGCAGAA GCAGCATTTT GAAGAAATAA AAGGTTCACT GCAGCTGACC CCCCTAAATG 001840
001841 GTTGAATTAA AATTTATTAT AAGGCATTAC TTTTTGTAAG CGGAAAAAGT GTCACATTTA CCTCTTCCCT ATCTTTTGTT 001920
001921 TAAAAGGACT GTCTTTATTT TATATTGGAT GAAATCTATG AACATATATA C
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Predicted Small Protein

Name NONHSAT070942_smProtein_818:952
Length 45
Molecular weight 5021.81
Aromaticity 0.136363636364
Instability index 41.3409090909
Isoelectric point 6.10174560547
Runs 9
Runs residual 0.0414438502674
Runs probability 0.033710180769
Amino acid sequence MLSADIGRKYITKNRSWFLVFLVAVFLIEGMWDGGDRSLSIVSE
Secondary structure LLLLLLLLEEELLLLEEEHHHHHHHHHHHHEELLLLLEEEEEEL
PRMN -
PiMo -