NONHSAT071128
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071128 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1977 nt |
Genomic location |
chr2-:64926768..64944264 |
Exon number |
5 |
Exons |
64926768..64928250,64928435..64928515,64928910..64929001,64930078..64930185,64944052..64944264 |
Genome context |
|
Sequence |
000001 TGGACCGTAG GGGTGAAGCA GGGGAGAGAT ATTTCAGAGA GAGGGAATTG CAGGGAAAGA CTTGGAAATG GCAAAGCCCA 000080
000081 AGCCATATAT ACAGGAAGTA GTTCCTTGTG CTGGGTGATT GAAGCAGAGA GAATGTTAAG GAAAGAAATT CTAACTAAAA 000160 000161 AGCGGGGACA ATAGATGGAC CAGATGGGAG AGACGTGAAG TTCATGCTAA GGAAAGTTCA GGGATGGGGA AGGTTCCGAA 000240 000241 GAGCATCGTT CATTTATTCC GAAGATAAAA CAAATTATTT CCTCAGGATG CTTCAGTTGG TTGCTGGTCT AGCCTAGGCC 000320 000321 TGCCTGGGCA AAAGAGGAGC GAGACTCCGT CTCAAAAAAC AAACAAACAA ACAAACAAAC AAAAACAGAA ACTGATTGTG 000400 000401 GTCTATTTAA AAAGCAAAGG GGATGAAATG CACTGACTGG CCAGGCCTAG GCCATGTGCC CATCCCTGGT GCCGAGAATT 000480 000481 AAGTCATCCA GACTTTATAA AATCTGTTCT TCATTGTACA TGGGATTATT AAAATACCAG TAAGGATTTA TTAAAATACC 000560 000561 AATAAGGAAA GTAAGCTTCA TTCTTTATTT TTCAATCAAT TATCTTGAAT TAAAGAAGGC TGTGGGGCCG GCTGCGGTGG 000640 000641 CTCAAGCCTG TAATCCCAGC ACTTTGGGAG GCCGAGGTGA GAGAATCACC TGAGATCAGG AGTTCGAGAC CAGCCTGGCT 000720 000721 GACATAGTGA AACCCCGTCT TTACTAAAAA ATATAAAAAT TAACCGGGCA TGGTGGCCGG TGCCTGTAAT CCCAGCTACT 000800 000801 CGAGAGGCTG AGGCAGGAGA ATCACTTGAA CCCGGGAGGC AGAGGTTGCA GTGAGCTGAG ATCACGCCAT TGCACTCCAG 000880 000881 CCTGGGGGAT GAGAGAGACT TCGTCTCGAA AGAAAGAAAG AAAGAAAGAA AGAGAGAGAG AGAGAGAGAG AGAGGGAGAG 000960 000961 AGAGAGAGAG AGAGAGAGAG AGAGAAAGAA AGAAAGAAAA GCAAGAAAGC TCTAAAGATG AGTAAAGATT TGCTTATTTT 001040 001041 TCATTGTATA CGTGGAATAT GGATTCTTAA ATATGCAGGA TTCACACATG GTGAGGGTAT ACATTTTACT AAAGGACTGT 001120 001121 ATATTAGTGA AATTTGATAT AGTATTCTAG ACATGTCTAG AGGGATACAT AACAGGCATA CACTAGGAAA GCCAAAACTA 001200 001201 AAACTAAAAA AAAAAAAAAA AAACCTCAAT CACATGGCAT AAAAAGTCAT TGCTGTGTTT TACAAGACAG TCCTGTAGTC 001280 001281 ATTCAAAACT GTTTCCCCAT TTGAGTCACT AGTTACTCAA TATATTTTCT CCCATGAATG TCTGTAATAT GTATTTTAGC 001360 001361 AAACAGAAGA GTATCAAGAA ACAATGTAGT GTAGTGAAAC AAACATGGGT TTTGAAGTTA GACAAACTTG GGTTTCAATC 001440 001441 TGATGTTTGT TTGTTTTTTT GATATGAGAT GAGATCTGTA TTAGTCCATT CTCAACGCTG CTGATAAAGA CATACCTGAG 001520 001521 ACTGGGTAAT TTATAAAGGA AAGAGGCTTA ATTGACTCAC AGTTCAGCAT GGCTGAGGAG GCCTCAGGAA ACTTACAATT 001600 001601 ATGGCGGACG GGATGCAAAC TCGTCCTTCT TCACATGGTG GCAGCAAGGA GAAGTGCGAG CAAAGTGGGA AAAACCCCTT 001680 001681 ATAAAACCAT CAGATCTTGT GAGGACTCAC TTCGCTATCA TGAGAACAGC ATGGGGGGAC TGCCTCCATC ATCTAGTCAC 001760 001761 CTCCTACGAG GTCCCTCCCC CAGTGCATGG GGATTACAAT TTGGATTACA ATTCAAGATG AGATTTGTGT GGGGACCCAG 001840 001841 AGCGAGACCT TGTCAGGATC TTACTGTGTT GCCTCTCTGG GCTCAAGCGA TCCTGGTACT TCAGCCTCCT GAGCAGTTGG 001920 001921 AATTTCAGGG GCACACCACT GTGCCTGGCT TCCAGTCTGA TCTTAAAGGA TATGACC |
Predicted Small Protein
Name | NONHSAT071128_smProtein_203:316 |
Length | 38 |
Molecular weight | 4423.1742 |
Aromaticity | 0.162162162162 |
Instability index | 46.7243243243 |
Isoelectric point | 10.9467163086 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.015562621445 |
Amino acid sequence | MLRKVQGWGRFRRASFIYSEDKTNYFLRMLQLVAGLA |
Secondary structure | LLLLLLLLLLLLLLEEEELHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |