NONHSAT071192
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071192 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1752 nt |
Genomic location |
chr2+:65952595..65982088 |
Exon number |
6 |
Exons |
65952595..65952899,65953713..65953756,65955407..65955515,65957632..65958675,65960026..65960068,65981882..65982088 |
Genome context |
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Sequence |
000001 acttgattag agaattggaa ttttcagtcc ctcaccctga cttctggaga gggagaggga tggagattga attcaatcac 000080
000081 caatggccaa tgatttaatc aaccatgcct gtgtcatgga acacaggaaa cctaaacaac ataaaaatcc ttaacaacag 000160 000161 ggtttggtga gcttctggat tggtgaacac attgaggtgg tagaaggcta gagttcagga gatgacatgg gaagacatgg 000240 000241 aagctttgtg tcccttccca tataccttgc tctctgcatc tcttccattt ggctcctcct gagttGTGAT TATTGGCGTG 000320 000321 CCTCTCAACA TCCAGCAGAA TGTGGGAATT GAACATTggc tgggcacggt ggctcacacc tgtaatccca gcactttggg 000400 000401 aggccgaggt ggctggatca tttgaggtca ggagtttgag accagcctgg ccaacatgGG TTTCATGGCA TGATATGGCT 000480 000481 CAATCCACAG ACAAAGGCTG CTGAGCCCAG AACAGCTTAT TGGACGAGCC CCTATGAGAA GCAGAAATGT ATAGAAGCAA 000560 000561 ACTGAACCCA AGGAAAGATT GGTGATACTT TGGGAGGGAT GACAGAGGAA GGGGAAACAC ACTGTCCATC CCTGTCCCAG 000640 000641 CAAGGAGCCA GCTCCCATTC GGCAGTCCCT CTGAACATCT AGGTAGCTTC CCCCTTCTTT CTGTCCAGTT GTGAGCAGCC 000720 000721 ACCAACTATG ATGCCCCTCT TCCAGCAGGC TTTGCTTTCA CATCACAAAG CATCATCCTG AGAAACAATT ACAGTTCTTT 000800 000801 TTAGAGTTCT GGTTCCTTCA TAGGTACCTA TTGTCCTAAT AAATGGAATT CCTTGGAACA CAAAAGCATT TATTTCCTCT 000880 000881 TTTAGCTAAT TTAATTTTTA CAGCTCTGGT GAAAAAATAT TTTATGTTTT TACTCAATGT GATTTTAAGA TAGCTTATTC 000960 000961 TTGGATTCAA TTTTGTTTTC ATTTTCTAGA AAATCAATTT AATTCACAGA AGGTTCATTC ATTTAGTGGC TTTCCTTGCA 001040 001041 CATGGTTAAT GCTTAAGCAT TTGATCAAGC ATTCCTCTTA GCAATATCTT TACAAGGTTC AACCGGAGAA GGTGTTAGAT 001120 001121 GGGGGAAATC CTCTACATTT GGgcaaagcc tctttcctct ggactaattg aaatggaaaa tcagtctgaa ttggtgaaat 001200 001201 tgaattgcaa actatttttc aaggagattc ctgtgtgatt tcaagttgct caaactaaac ttagaaaagg gcacactaac 001280 001281 aaagcttttt aagttatctc catctagctt cctagtgaag aggctacatt gtctgggtaa atacctgggg ttcgtcatct 001360 001361 catgccaaga aaatttagga cacggaccca catgaggagt ttaggaacgg agatttaata ggcgaaagaa aaggaaagga 001440 001441 aaacagctcg ctctctagag tgacagagag gagacttctg agaggaaaag gccagctggc ggGATCTATG CCTTGATAGG 001520 001521 TCTTCAGTTA CTCATGGTGA AACATGATTG CTGAGTTGAG TAAATATTTC CTTCCATAAA GGTAAATAAG CATCTCAAGA 001600 001601 GCAAGTTTCT ACATTTTGTA TTTCCCTGTT TTATTTCTGT AAAATTGTGC AACCAAGAAT TATGACCTAC TGATATTAGA 001680 001681 ATAAAATTTG CAGAAGTTTG ACTACATGAG CCAGATGGGT ACTTACACCA GTGATTACTG AGCGTTCACC AG |
Predicted Small Protein
Name | NONHSAT071192_smProtein_1118:1237 |
Length | 40 |
Molecular weight | 4512.3553 |
Aromaticity | 0.102564102564 |
Instability index | 41.8307692308 |
Isoelectric point | 5.06207275391 |
Runs | 6 |
Runs residual | 0.0148944193062 |
Runs probability | 0.0389801566272 |
Amino acid sequence | MGEILYIWAKPLSSGLIEMENQSELVKLNCKLFFKEIPV |
Secondary structure | LLLEEEEEELLLLLLLEEHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |