NONHSAT071260
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071260 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
531 nt |
Genomic location |
chr2+:67294044..67325210 |
Exon number |
4 |
Exons |
67294044..67294131,67310035..67310131,67323915..67323997,67324948..67325210 |
Genome context |
|
Sequence |
000001 TGTGTAATTG GATTTTATAT CCCTAGCACC TGGCACAGTG CCTACCACAT AACAGGTGCT CAATAAACAC TTATTGAATG 000080
000081 AATTATAATT TTTAAGTTTA ATCCATAACA GATAAGCATG GCATGTCAGT TATGCATTGT GCATTGTGTA GCCTTAAGGC 000160 000161 AGACAGACAC TATCAGCTAA ATGAAAGCAA ATACTTATGG TATAACTACT TTGTGGTGGG AATTCTGTTG GGTTCAGAGC 000240 000241 TATATTCTCT GTTCAAATTG TTCATTTATT CGTCTACCTT CAAGAGACCA CTTAGGGCAT CTTCATAAAA AGATGGGGTC 000320 000321 CAAAAATCAA ATGAAAACAG CATTAGACAA ATGTTTTTAT GCTAGTCTAT ATCATATCAA ACATTGAGAT ATTGGGAAAT 000400 000401 GTCTAGGCTT ATAAATACTT TTTTAAAGTT TATATATATA TATATATTTT TATTACACTA AGTTCTAGGG TACATGTGCA 000480 000481 CAACGTGCAG GTTTGTTACG TATGTATACA TGTGTCATGT TGGTGTGCTG C |
Predicted Small Protein
Name | NONHSAT071260_smProtein_122:307 |
Length | 62 |
Molecular weight | 7190.3474 |
Aromaticity | 0.180327868852 |
Instability index | 57.0180327869 |
Isoelectric point | 9.30096435547 |
Runs | 11 |
Runs residual | 0.0275108347466 |
Runs probability | 0.0429734547382 |
Amino acid sequence | MSVMHCALCSLKADRHYQLNESKYLWYNYFVVGILLGSELYSLFKLFIYSSTFKRPLRAS S |
Secondary structure | LLHHHHHHHHLLLLHHHHHLLLHHHHHHHEEHHHLLLHHHHHHHHHHHHLLLLLLLLLLL L |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL L |
PiMo | oooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiii i |