NONHSAT071260

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT071260

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

531 nt

Genomic location

chr2+:67294044..67325210

Exon number

4

Exons

67294044..67294131,67310035..67310131,67323915..67323997,67324948..67325210

Genome context

Sequence
000001 TGTGTAATTG GATTTTATAT CCCTAGCACC TGGCACAGTG CCTACCACAT AACAGGTGCT CAATAAACAC TTATTGAATG 000080
000081 AATTATAATT TTTAAGTTTA ATCCATAACA GATAAGCATG GCATGTCAGT TATGCATTGT GCATTGTGTA GCCTTAAGGC 000160
000161 AGACAGACAC TATCAGCTAA ATGAAAGCAA ATACTTATGG TATAACTACT TTGTGGTGGG AATTCTGTTG GGTTCAGAGC 000240
000241 TATATTCTCT GTTCAAATTG TTCATTTATT CGTCTACCTT CAAGAGACCA CTTAGGGCAT CTTCATAAAA AGATGGGGTC 000320
000321 CAAAAATCAA ATGAAAACAG CATTAGACAA ATGTTTTTAT GCTAGTCTAT ATCATATCAA ACATTGAGAT ATTGGGAAAT 000400
000401 GTCTAGGCTT ATAAATACTT TTTTAAAGTT TATATATATA TATATATTTT TATTACACTA AGTTCTAGGG TACATGTGCA 000480
000481 CAACGTGCAG GTTTGTTACG TATGTATACA TGTGTCATGT TGGTGTGCTG C
[back to top]

Predicted Small Protein

Name NONHSAT071260_smProtein_122:307
Length 62
Molecular weight 7190.3474
Aromaticity 0.180327868852
Instability index 57.0180327869
Isoelectric point 9.30096435547
Runs 11
Runs residual 0.0275108347466
Runs probability 0.0429734547382
Amino acid sequence MSVMHCALCSLKADRHYQLNESKYLWYNYFVVGILLGSELYSLFKLFIYSSTFKRPLRAS
S
Secondary structure LLHHHHHHHHLLLLHHHHHLLLHHHHHHHEEHHHLLLHHHHHHHHHHHHLLLLLLLLLLL
L
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
L
PiMo oooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiii
i