NONHSAT071318
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071318 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1017 nt |
Genomic location |
chr2-:68913452..68917828 |
Exon number |
2 |
Exons |
68913452..68913686,68917047..68917828 |
Genome context |
|
Sequence |
000001 CAAAAGTGCA AGCTAAAATA TTAACCTGTT AATTGGTTAA TAGTTATAAG GCCTAATGAC ACCTTTGAAT CAAAAGATAT 000080
000081 ACTGTATTCT GCTTCATTTT GCAACAATAC TAGGAGGTAA GAAACACTGA CTATTTCCTG GGTGTCAGGT ACACAGTACC 000160 000161 TTATTTCATC TAATCCATGG TCAGCTCCTC TTTGGCTCTC GGTACTGAGG ATGAGTTCTG GTCCCAGAGA CCAGAGACAG 000240 000241 CAGAGAAGAC ACAAAGTAAC CACAGGCCTT TTTCCATTTC AGTTGGTAAT ACACCTCTTC GTTATGAGAG TTAATGCAAA 000320 000321 TGAGCACAAT CTAAATGAAG CCCCGCGGAA TTACTCAGAA AGGGGAAGGC AATGCAAGAT TTCCAAAGGA GTCTTGCAGA 000400 000401 GAGAAACAGG AGAGCCCTGG GTGGTAATAG CTATCTCATT TCCTGCTAGC ACTTTCTCGC CACATCACAC CACTTCTCTG 000480 000481 TTTTTCTGCT TTATCAATCA GTAAAATGAG AGCCTCAAGA CAATAAGGCC CATGGCCCAG AGATCATGAT TAACTGCAAG 000560 000561 ATTCAAAATC AGCTGCAAGA GAACGAAGCT GTCACATGGG TTTCTAAAGA ATATTTGCCT CTTTCACTAA AGGGAGAATG 000640 000641 AAGGTTGCTT AACCTCTCTG TGAAATAAGT TTCAGTTCCT CTTCTATGAA TGACTGGCTA AACTTCATTT TCTCTAAGAC 000720 000721 CCTCTAGTAT TCAGTTCTCT TCCCACCTGC TTGGCCTAAT CCTGCATGAG AGGCAATGAT TGATCTCAGG CATGTGCTAC 000800 000801 TCGCTTTCTG GGTACTCTAG AAATAATCAC ATAGGCCCTT TTGTTTGGCA TGTAAAAATC CAGTTCTGTC TAATAGATTC 000880 000881 TTAACCAGTC GAGTTCCATC TAAGTAGAAT GCTTCTCTCC TACCCTAGCT TGCTCTGTTT CCATTCAGAC GCCTCTCTGT 000960 000961 GGGAGGGCCT GCTTCCTTCC CTGGACCTTT GCATATCCCA TACCAGGAGC TGTGAAC |
Predicted Small Protein
Name | NONHSAT071318_smProtein_176:313 |
Length | 46 |
Molecular weight | 5071.4621 |
Aromaticity | 0.0888888888889 |
Instability index | 53.6311111111 |
Isoelectric point | 5.05389404297 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0406919524566 |
Amino acid sequence | MVSSSLALGTEDEFWSQRPETAEKTQSNHRPFSISVGNTPLRYES |
Secondary structure | LLLLLLLLLLLLLLLLLLLHHHHHHLLLLLLLEEEELLLLEEEEL |
PRMN | - |
PiMo | - |