NONHSAT071668
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071668 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1674 nt |
Genomic location |
chr2+:74375227..74382164 |
Exon number |
2 |
Exons |
74375227..74375605,74375825..74382164 |
Genome context |
|
Sequence |
000001 GGCCTGTTTC ATGGATAGGG TCCCCTTGCC CGCGTGAAAG TCTCATTCCT CCTCAGCTCA GAAACACTCC AAGGTCTCGG 000080
000081 CGCCCTATAC TGGCCTTCCC TCATCCGAAT ACCCCTCGTG CTCCTGATGT ACTTTTCCAT TCCCACTCCC TACTCTGGCA 000160 000161 GTCTAGCTTC TAAGCTGAGG AGTTTGGCCT TCGCTCCAGG TGCGGGGACT CGTGGAAGGA TTTGATTCGC GCTTGAGAAA 000240 000241 GATCGCTCCG CTCCTGTAAG GAAGAGAGCG TGTAGGGGCT GCAACCAGAG ACACAGTCAG AAGCTCCGAG GCTACCGCGA 000320 000321 TGGTCCAGGT GCCACAGGAC ACAGCCTAAC AGAGGCCCAG GTTGGAGCCA TGGACCATGG AGTCATGAGA ATGGAAGGGA 000400 000401 AGCTGACGCC ATGTGGGATG GGGTAGAACT GTCCGCAAAT TCGTCCCGCC TCTGGAGTCT TCAGACCAGT CAAGGCCGAA 000480 000481 ATTCAACCAA GCCTCTCCTC TCTCTAGCTG TTATTTGTTT GCAGCACGCG GTCTGGTGGC ACCCTGCAGG ATTTACCAGC 000560 000561 TTTTTGCCAA CATTCTGGCC TATGCAATCA ATACGTCCCT TCAGCGTTGC ACTTGGATGG ATTGGACCTA TAGTTGTTAT 000640 000641 ATATGGATAT TGTCTAATTT ATTTATTACA GTATTAACTG ACTCCTATGT TCTGGCCTTC AGAATTTCTC CTTTGGATCA 000720 000721 ATTACTAGCC TGTCTTACAT TTTCTGCTTC ATTCTTTTAA AATGTTTAGA GATGATTTGC TAAGTTTTCT TCATTGCTGT 000800 000801 CAATGATGCA ATTTAAACTG TCAAAAAAAT TTTTTCTCAA GCAGGGTAGT AATGGTGAAC CATTCCCTTG CTATTCAGAC 000880 000881 AGCATGGTTT AGATGAGGCG CACCTATCCC CAGCTTTAGG AATGGAAACA GGACCCAAGT CTGGCTAATC AGAGACTGGT 000960 000961 TTAGGGTCGG CCCCATGGTC TGAGCCAGAC CAATGAGAAT TGGTAGAGGG ACTTCCTTTT GCAACTTCTA TTTTAGAATC 001040 001041 GGGGGTATAT ATGCAGGCTT GTTACAGAGG TATATTGCAT GGTGCTGAGG TTTGGAGTAT GAACGAATCC GTCCTTCAGG 001120 001121 TAATGAGCAT AGTACCCAAT AGGTAGTTTC AACCCTTGCC CCCTTCCTCC TTCCCCAGTC TTGTATTCCC CAGTGTCTGT 001200 001201 TGTTCCCAGA CATTGATCTT TTTCCTCTAT GTTGCTAAGC TGGTAGAAAG GCTGGAGTTG CTGGCAACCA TCTTTGCAAC 001280 001281 CATGCAGGGA GAACTACTTT GGAAATGAAG CAAGATAAAG AAGAAAACAG ATAAAAGGAG ACAAATGTTT GACTTTGTAC 001360 001361 AGCTGGAAAC CAGCAATGCT GGAAATGAGC ACTGAAGGCA GTTTAATGGG TTTGTCACTT GTAACCAAGT GACCCATGGC 001440 001441 AAGCTCACAG ATTTGTATTG GCAGAATTCC TCCTTTTCTT TATTTAAAAT GGTACTTTTG GCCAGGCAAG GTGGTTCACA 001520 001521 CCTGTAATCC AAAGACTTTG GGAGGCCGAG GCGCACTGAT CACCCAAGGT CAGAAGTTCG AGAACAGCCT GGCCAACATT 001600 001601 GGCGAAACCC CATCTCTACT AAAAATACAA ACCATTAGCT GGCTGCGGTG GCCTTTCTAC CAGCTTTTTG TCTC |
Predicted Small Protein
Name | NONHSAT071668_smProtein_410:676 |
Length | 89 |
Molecular weight | 10016.601 |
Aromaticity | 0.159090909091 |
Instability index | 48.6306818182 |
Isoelectric point | 8.76934814453 |
Runs | 14 |
Runs residual | 0.0277272727273 |
Runs probability | 0.0542370101194 |
Amino acid sequence | MWDGVELSANSSRLWSLQTSQGRNSTKPLLSLAVICLQHAVWWHPAGFTSFLPTFWPMQS IRPFSVALGWIGPIVVIYGYCLIYLLQY |
Secondary structure | LLLLEEEELLLLHHHHHHHLLLLLLLHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL LLLLLLEELLLLLEEEEELHHHEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLL LLLLHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiii iiiiTTTTTTTTTTTTTTTTTToooooo |