NONHSAT071693

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT071693

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2164 nt

Genomic location

chr2+:74612845..74621009

Exon number

4

Exons

74612845..74612877,74618286..74618370,74618605..74618742,74619121..74621009

Genome context

Sequence
000001 GGCGGAGATG ATGCTTCAGT GGCTGCAGCA GGAAAAGCTC TTCGCCTCTC GGTACCTTAA GTATACCTGA GTAGCCAGTG 000080
000081 GTCAACATGG GTTTGCTGCT CTCCTCACTG CAATAAATGA CGGAAACCTG TAGCTCAGTA TGGATTCAGG GGCGCCTCAG 000160
000161 ACGCTCGCAG GAACGGAGGG GAGACCCTTG CAGTTCTGGA GGAACTCTAA GGCGCAGTCA CTCTGATCCC AGGAGAACAA 000240
000241 TGCTAGGCTG AAGAGCTGAG CCCTGACTGA AAACTGCGCA CCGACCGCAG CCGGGATTAC ATCAATCAGG CACAAAGCTG 000320
000321 GACACCTGGG ACAGGATAAG CGCACGCGCA CTGTGCCTGG GAAGCCGATT AGGACCATAA GAAATCGGCG TGTCGTGGCG 000400
000401 AGCGCCCTCT TTCGGCGGAG GGGAGAAAGC GCAGAAGGGC TGGAGGACTT ATTTGCAAGT GTTAAACTGC TAATTAAAAC 000480
000481 AATAGCGATA AACCATATCT CCTCCATTAG CCTGGGGGAG AAAATTAAAT GTTGCTGCTA CTCAGTGTTA CCTGTCATAT 000560
000561 GGGGATACAG GCATTCTCAT GCGCTTATGA TGGGAATGTA AAATACAAAT TTACATAATG GCATTTTAAA ATTTTAGACA 000640
000641 TAGGTTCAAA TTCTTTTTTT TCTGTTTTTA AGACAAGGTC TCGCTCTGTT GTCTAGACTG GAGTGCGGTA GCACGCACAA 000720
000721 TCATGGCTCA TTGCGGCCTT GACTTCTCAG GCTCAGGCCA TCCTCCCACC TCTCAGCCTC CGTAGTAGCT GGGTCTGCAG 000800
000801 GCGCGCACAA CCATGCCCTT TTAATTTTCG TTTTTTGTTT TTTGTTTTTT TGTAAAGACG GGGTTTCACA ATGTTGCCCA 000880
000881 GGCTGGTCTC GAACCCCTGG GCTCAAGCGA TCCAATCGCT TCGGCCTCCC AAAGGGCTGG AATTACAGAC ATGAGCCACC 000960
000961 GCACCCGCCT GGGTTCAAAT TCTAACTGCA ATTTACTAGC CGTGTGAAAT CTAGAGTTAC TTATTTACCC TCTCTGTGCC 001040
001041 TCTGTTTTCT TATTTGTTAA AGTGAGAATG TAAATGATGG TACCTATCTC ATTATGTTGT TAGAAGGATT AAGTTAATCC 001120
001121 ATGTAAAGAG CTGGAAATAT AACTATTGTA ATGTTATATT TATTTCAGTT AATCTCAGAT TTAAAACAAA CTGAAAAATT 001200
001201 CATAAAGTTG CTGTAAGGGG CAGTAAGCAG TAGAAGGGAT GCATTGAGTA TCCCCTTTAT TACTCCCCCC TTTTCCCTAT 001280
001281 TTCACCTTCT AAATATTTAT AATTATTATT TTGAATAGAT AATACGTTTA CATGGCTCAA AAATCAGAAC ACTATTTTAG 001360
001361 AATATACACA GAGAAACCTC CCTTCAACCC TGGTTCCCAT CGACTCCATC ACCCTTGCCT GCTACAGATA ATGCTTATTA 001440
001441 GTGTCTTCTT GTTTATCTTT TCAGTGTTTT GTGCAAATAT AAACTCATAT GAATATATAG TCTTACTCCT CCCATTTCTT 001520
001521 ATGCCAAATG TAGCATGCCA GATACAATTG GCATAAGTTC TGTTCACTTA ATCTATTCTG AAAATCTTTC TAAATCAATA 001600
001601 AATTAGAGAT CTTCCTCATT TTTCAGCTGC TTAGTACTCT ATTGCATGGA TACACATAAT TTATTAACCA GTTTCTTCTA 001680
001681 GTTACATACT TTATTTCCAG TCTTTTAGTA TCACAATCTT GCAATGAATC ACTTTGAACA TAATGACATT CCAATGTGAG 001760
001761 CAGGCATATC TCTAGGATAC ATCTTGGTCA AATAATAAAT GTATCTATAA TTTTAGTAGA AATGTCTTCC ATCTCCTTCA 001840
001841 ATTAAAGAAA AATAAAAAGT AAATATAAAG ACTTTAAAAG ATACTGCATA TACATATTTT TAATTGTCGT AAAGCATACA 001920
001921 TAACATGAAA TTTACCATTT TAACCATGTT TAAGTTCAGT GGCACTCAGA ACATTCACAT TGTTGTGCAA TCATCACCAC 002000
002001 TATCCATCTC CAGAACTTTT TCACCTTTCT GTACCAAAAA CAAACATGTA AGCAAACAAA ACCCTCTGTG ATGATCTGAC 002080
002081 AAAAAAACTA AAGTGTATGA TAGAATGTGT GTAGGTTATA TATAAATAAA ACACAGTTGG CCCTCTGCAA AAAAAAAAAA 002160
002161 AAAA
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Predicted Small Protein

Name NONHSAT071693_smProtein_1331:1555
Length 75
Molecular weight 8658.2315
Aromaticity 0.148648648649
Instability index 49.7405405405
Isoelectric point 7.77960205078
Runs 9
Runs residual 0.0210283454186
Runs probability 0.0444365934562
Amino acid sequence MAQKSEHYFRIYTEKPPFNPGSHRLHHPCLLQIMLISVFLFIFSVFCANINSYEYIVLLL
PFLMPNVACQIQLA
Secondary structure LLLLLLLEEEELLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHH
HHHLLLHHHHHHLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLL
LLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTToo
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