NONHSAT071709
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071709 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
919 nt |
Genomic location |
chr2+:74686339..74687555 |
Exon number |
3 |
Exons |
74686339..74686872,74687000..74687176,74687348..74687555 |
Genome context |
|
Sequence |
000001 TGAAAGCAAC TTGCTTTGGA AATGACCTAC CGCTACCCGT TGTCTGAGAC TGAGATTATC TCAGACTGTC TTCTGGCTTC 000080
000081 TGCCAAAACA CTCCCTTAAC AGAAAGCACC GAGGGGATGG GGGTAGGGGG GTTGGGGAGA GTGAGGCTtg agtgtgaagg 000160 000161 aagtctcata tatgcagagc tgaaatctcc ctctttgtat gtccacactt ttgtcttgtt ctctagactg attcttgcta 000240 000241 ttccaaatcc tcttccacgt tgacagccct tcagatattt caacactcct ctcagcatcc tccacttccc ccatctctcc 000320 000321 aagctgaacT TGGTTCACAG GGTGGGATTG TGTATGTGCA TGCAGGAGGT GGGGGTGGAC AGTGCCCTGG GCTGGAATCC 000400 000401 CCCTTAGTTC TAAGTGCCTC CTTGCCCGCA GCTTCGAGAG CTGTGCCCAG GAGTGAACAA CCAGCCCTAC CTCTGTGAGA 000480 000481 GTGGTCACTG CTGCGGGGAG ACTGGCTGCT GCACCTACTA CTATGAGCTC TGGTGGTTCT GGCTGCTCTG GACTGTCCTC 000560 000561 ATCCTCTTTA GCTGCTGTTG CGCCTTCCGC CACCGACGAG CTAAACTCAG GCTGCAACAA CAGCAGCGGC AGCGTGAAAT 000640 000641 CAACTTGTTG GCCTATCATG GGGCATGCCA TGGGGCTGGT CCTTTCCCTA CCGGTTCACT GCTTGACCTT CGCTTCCTCA 000720 000721 GCACCTTCAA GCCCCCAGCC TACGAGGATG TGGTTCACCG CCCAGGCACA CCACCCCCCC CTTATACTGT GGCCCCAGGC 000800 000801 CGCCCCTTGA CTGCTTCCAG TGAACAAACC TGCTGTTCCT CCTCATCCAG CTGCCCTGCC CACTTTGAAG GAACAAATGT 000880 000881 GGAAGGTGTT TCCTCCCACC AGAGTGCCCC CCCTCATCA |
Predicted Small Protein
Name | NONHSAT071709_smProtein_116:262 |
Length | 49 |
Molecular weight | 5284.2486 |
Aromaticity | 0.0833333333333 |
Instability index | 46.3458333333 |
Isoelectric point | 9.18341064453 |
Runs | 8 |
Runs residual | 0.00109649122807 |
Runs probability | 0.109764175941 |
Amino acid sequence | MGVGGLGRVRLECEGSLIYAELKSPSLYVHTFVLFSRLILAIPNPLPR |
Secondary structure | LLLLLLLEEEEELLLEEEEEEELLLLEEEEEEHHHHHHHHHLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | ooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiii |