NONHSAT071868

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT071868

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2925 nt

Genomic location

chr2-:79362629..79365553

Exon number

1

Exons

79362629..79365553

Genome context

Sequence
000001 GTTATACATC TCTACCATTA CCTAGCCTGA AAAGCCACCT CAGATTCAGC CAACAAGTAA GTGGGCATTA CAGGAGAAGG 000080
000081 GTACCTTTCA CAAGGGCTGT AATCTAAAAT CTTGGGGAAG ATACAGCGTC ATCTGTCCAA GAGGTGTCAG CAGTAACGAA 000160
000161 GCCTCAGTAG AAGCCAAAGT TATTTTGGAT TACTGAGCCT GTATAGTTTC CAGATTCTCA AGAGAAATAT ATGGGAATGT 000240
000241 AGATATCTCA GAGGACCTTC CTGCTGTCAG GAATTCAGAG GAGGAAATAA GGAAGGTAAT AGGTGCTCTG CTCTCATTCT 000320
000321 CTCAAACCCT CTTCCCTGTG TTTTCCTATA GAGATTGCTG ATTTGCTCCT TAAGCAAGAG ATTCACTGCT GCTCAGCATG 000400
000401 GCTCAGACCA ACTCATGCTT CATGCTGATC TCCTGCCTGA TGTTCCTGTC TCTGAGCCAA GGTGAGATTG TTTTCCCCAC 000480
000481 ACATACCTCC CACAACCCCA GCCCTGAAGC CCTCACTCTA TCCTCATGCA TATGAGTTCA CTTGAGAAAA AGCAGAGTCA 000560
000561 AGTTCAGGGG TTGTCTTGTG TTGTTCAGTG ATATTTATTG CTGATCTCAT CCCATTCAAA AACATCCTGA CCTCCCTAAG 000640
000641 GAGTTAGAGA TGGAACTTAG CATAACCCTT TATCAGTGAC CACTGCAGTT GGCATTGGTT TGTCATATTA ACACTACTCA 000720
000721 TGATGGGGGG GTTGAGGATG TCTGTTTGTA GACAGTCATT AGTGGAATGG GGAACTGAGG GGAGCTTTGT GTGTAGAGAA 000800
000801 ACTGGACAGG CTTGAGAAAG AAGCCTCAGT CCTTCAAGGA AGAAAAAGCC ATAAGTAAAA GGGACAATGG GGACACTTTT 000880
000881 CATGAGCCTA TTCATTGTGT GCTCTTGTCT TGAGCAAAGA CATCTTGAGA GCCTATAGGT AAGATGCAGA AGGGCAGAAG 000960
000961 TGACCAATCG CTTCGTGACC TATAGGATCC TTCTATTCCT ATAAAGAATC CTCAGAAGCT CCTACCTCAT ATTTTAGCCT 001040
001041 TTACCTTGCC CTGAGGGTCT TTCTTAATTG TCTCTCTTTT CCCAGGACAG GAGGCCCATG CTGAGTTGCC CAAGGCCCAG 001120
001121 ATCAGCTGCC CAGAAGGCAC CAGTGCCTAA GGCTCCCACT GCTACTACTT TAATGAAGAG CATGAGACCT GGGTTTATGC 001200
001201 AGATGTGAGT GAGGAGAGCA GTGTGGGAAG GGAGGCTCAC GAAGGGAGGG GAAGCTGCCA CTCTCCAGTG TGTTCAGTGG 001280
001281 CTGATATGAG ATGAGACTAA TCCCCTCCCT ATCCAATCAT CAGCCCAAAA CTTTCCAATC TACTTTATCC CATCATTCAG 001360
001361 CACAGAGATG CTGGTGGTCA GTGACAGCAT CATCAGGGAC ATTTCTGTGC TGTCCTTTTT CTGTTACATC CTCTGGGAGG 001440
001441 GCTCAATATG TCTCCCACAC TTTCCTCCTT CACTGAGTGC TCCATTTTCT TCTCCAACAG CTCTACTGCC AGAACATGAA 001520
001521 TTCAGGTAAC CTGGTGTCTG TGCTCACCCA GGCTGAGGGT GCCTTTGTGG CTTCGCTGAT TAAAGAGAGT GGCACCAAGG 001600
001601 ATAGCAATGT CTGGATTGGC CTCCATGACC CCCACCGGAT CAGTCTGCTG CATCTTCTAC CTCCTGATTA TCAGGTTCCA 001680
001681 GAGGGTCTGA TGTCTGGCAC CTCAAGCATC AGTTTTTACT ATATTATGAT AAAAGCAACC TCTCTATAAA TCATATAATG 001760
001761 TAAAGGATAT CAAGGTTCTC CATAGGTTCT TCGAGATAAG CTTAAAGCTG AATTTCCTGT GTGTTTCAGG CATTCACAGA 001840
001841 TAAACTCATT CTCTGTACTT CTAGGGTAGC ATCTTTATGT ATCTATTATG TACCTCTTAT CTATTGTGTT ATCATCTCTG 001920
001921 TTATAGAAGA GCCTTCTGTA GACCATATAG AAAAAGATTA TAGAGGAGGA GAATCTACTG CTGGCAATTG GGAACCGCAA 002000
002001 GGTATACTAA ATAATATATC AACAACTAAT GGCCATCTAA TGCTATGCTG GATATGAACT TTTGGGGCCT CAGGAAAGAA 002080
002081 AAACCAGGAA CTAGTTTCAA TAATGAGGTG TCATGGTTCC CTGTGGCAAA TTTAGAACAC TTATCGTTTG GCAGGACACA 002160
002161 GAGAGGTAGG TGAACATTCC AGGAAAGAAG CAGCTTAGAG AAAATGTGGA GGAAATAATA TGACACTTAG AGAAAAAGGA 002240
002241 AGGTTTATTC TTGTCTTATG TCTTGACCTG TTTCTGAGTG CGAACACAAA CCAGGTGTTT CTGTCTCTTT CTGAGTCACG 002320
002321 TCTGCCCCTG TTCTGGCCCT TCCCCATCTA GAACTGCCAT TATCAGTGGA GTAGTGGGTC CCTGGTCTCC TACAAATCCT 002400
002401 GGGACATTGG ATCCCCAAGC TGTGCCAATA CTGCCTACTG TGCTAGCCTG ACTTCAAGCT CAGGTGAGAG GCACAGAATC 002480
002481 CACACACTTA TTGCCATCCT CTCCTATTTA TCTCTGAGGA TCGACCGGGG ACTGGGATAG AGGAAGGGTG AGCTCCTCAT 002560
002561 TCAGGAAATA GAGGAGTGTT TCCTCTTTAT TTTTGCTGAG TCCTGCAGCC AGGAGGGTAA TACACTCTGA TCCCCTCAGT 002640
002641 CTGAATCTTC TCATTGTCTT ATAGGATTCA AGAAATGGAA GGATGATTCT TGTAAGGAGA AGTTCTCCTT TGTTTGCAAG 002720
002721 TTCAAATACT GGAGGCAATT GTAAAATGGA CGTCTAGAAT TGGTCTACCA GTTACTATGG AGTAAAAGAA TTAAACTGGA 002800
002801 CCATCTCTCT CCATATCAAT CTGGACCATC TCTCCTCTGC TAAATTTGCA TGACTGATCT TTAGTATCTT TACCTACCTC 002880
002881 AATTTCTGGA GCCCTAAACA ATAAAAATAA ACATGTTTCC CCCAT
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Predicted Small Protein

Name NONHSAT071868_smProtein_1367:1528
Length 54
Molecular weight 5966.8981
Aromaticity 0.132075471698
Instability index 62.4433962264
Isoelectric point 4.86285400391
Runs 9
Runs residual 0.00954901058444
Runs probability 0.0155449567215
Amino acid sequence MLVVSDSIIRDISVLSFFCYILWEGSICLPHFPPSLSAPFSSPTALLPEHEFR
Secondary structure LEEELHHHHLLLHHHHHHHHHHHLLLEELLLLLLLLLLLLLLLLLLLLLLLLL
PRMN LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooooo