NONHSAT071877
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071877 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
572 nt |
Genomic location |
chr2+:79520102..79547019 |
Exon number |
3 |
Exons |
79520102..79520403,79539835..79539922,79546838..79547019 |
Genome context |
|
Sequence |
000001 ATTCTGCAGC CACCCATATG TCACCACCTA CCTGCTTTAT CTCTTTGTCA CATTTTCATC TCTTTCTACT TCAACTTTCC 000080
000081 TTTGATTCAT CCCCAAAAGC TTTCCCCTAG GCCACTTGGC AGTATTCCCT CACTAGTCAA AATCTGGTGG GTCTTTCTTG 000160 000161 AGTGAGCTCT CAGAGCTGAC CTCCTTTTTT AAGACATCTA TTTGCATGCA GGTGGCCATC GATGACATCA ATGGTTTTGC 000240 000241 AGTATTGAGC CACATTTTGG ATTTTACCTA GAAGATGTGC AGAATATAAA TGTTTTCATG AGAACAAAAT ATACAGCTGG 000320 000321 ATGTTTGTCA CAATTCTAAT GTCCCTGCAA AGATGAGATG CATGAATCAC ACAGCAATCT CATCAAAAAG GAATTTCTGG 000400 000401 AAGGTAAGAA TAAAACACAA TGGACACTAA AACTTTTCTG CCCACGAAAG TAAGAGGCAT TTGAGAATTG TTCACTTTAT 000480 000481 CTTATGAGGC ATAGGAGAAG AGAATCCTGG AAAAAGCAAG AAGCAGGAAG ATAAGAGGCA AAGAAGAAGA GAGCCCCACC 000560 000561 CACTGGGGCA AG |
Predicted Small Protein
Name | NONHSAT071877_smProtein_17:109 |
Length | 31 |
Molecular weight | 3395.9427 |
Aromaticity | 0.166666666667 |
Instability index | 90.81 |
Isoelectric point | 6.68585205078 |
Runs | 5 |
Runs residual | 0.0355855855856 |
Runs probability | 0.0473237943827 |
Amino acid sequence | MSPPTCFISLSHFHLFLLQLSFDSSPKAFP |
Secondary structure | LLLLLEEELLHHHHHHHHHHLLLLLLLLLL |
PRMN | - |
PiMo | - |