NONHSAT071891
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071891 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
769 nt |
Genomic location |
chr2-:80780024..80950826 |
Exon number |
5 |
Exons |
80780024..80780261,80784268..80784330,80857106..80857199,80861411..80861638,80950681..80950826 |
Genome context |
|
Sequence |
000001 TAGGCTGGCA TAGCTGTTAG GAAGGAAATC CCCTATAACA TGAATCCTGA CTAGGAAACT GACACTCAGT ATCCCCATGT 000080
000081 TTTGGAGTGG TTTCACAATC TGCTGCTTGA ATTGCTTTCC CCACCTTAAC AGTGGAGGGT CAAGCTGGGC CCAATACTTC 000160 000161 TGATTTTGCT CTCATTAACT CAATTCCTAA ATACTGGTTT CTTGTTTACT GCTCAGAAAG ACCAGTCATG TTTGCAATGT 000240 000241 AAGGCCTTAG CGCTTACTAT TTCTTCTGCC TAGAAAACTC TTCCCCACCT GAGATACCTG TAAGGCTTGC TCCCTCACAT 000320 000321 CCATCTGAAC TTTATCCAAA TATCAGCATC TTGGTGAAAA CTACCCAAGC CATAGTCTAG AGGATTACTG TGGTGGGCTC 000400 000401 TCAGGGGCCT GACTTTTAGA GAAGTGTACC TCCACCCACT GACACCTGGC TGGAAACGAG GTTGGCAGTT TTTGTTATTA 000480 000481 TGTCTAAGTC TAAGTCTGTA AGGATGTTCC AAGGGCAACA GTCTCTAGAT GTTCTCCTGC CTCAGCCTCC CAAGTAGATG 000560 000561 GGATTACAGG CATGCACCAT CACACCTGGA TTTTTTTTTT TTTTTGTCTT TTTAGTAAAG ACAGGGTTTC ACCATGTTGG 000640 000641 TCAAGCTGCT CTTGAACTCC TGACCTCAAA TGATCTGCCT GCCTTGGCCT CCCAAAGTGC TGGGATTACA GGCATGACCC 000720 000721 ACTAGGCCCG GCCTAATTGA CTAATTTTTA TAAATAAATT TTTAAAATT |
Predicted Small Protein
Name | NONHSAT071891_smProtein_557:724 |
Length | 56 |
Molecular weight | 5842.7209 |
Aromaticity | 0.127272727273 |
Instability index | 40.9345454545 |
Isoelectric point | 6.20831298828 |
Runs | 9 |
Runs residual | 0.0121212121212 |
Runs probability | 0.0888928143831 |
Amino acid sequence | MGLQACTITPGFFFFFVFLVKTGFHHVGQAALELLTSNDLPALASQSAGITGMTH |
Secondary structure | LLLEEEEELLLEEEEEEEEELLLLLHHHHHHHHHHLLLLLHHHHHHLLLLLLLLL |
PRMN | LLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiii |