NONHSAT072120
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072120 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
555 nt |
Genomic location |
chr2+:86998424..87000720 |
Exon number |
3 |
Exons |
86998424..86998573,86998681..86998835,87000471..87000720 |
Genome context |
|
Sequence |
000001 ATTAGAGGTG GTGATCAGGT CATTGTTTGT CAGACTTGTT TTTACACTTT GTCAGCTTTC TTGAAAATAA TCTTGAAGGC 000080
000081 TAATTTAACA CTTTGAATCA CTAAGACTGT CCATCTGAGT TAGAAGAGTG CTATAGAAAG TTACATTCAG ATTGAAGTGG 000160 000161 ACCTTGGTAA AAAGTGCTGG TATCACTCTA TATTTGCCTG CCCCATTCTT CGTCAGCAAA CAACAGATAA CAATCCACCC 000240 000241 ATGAAATTGG TCTGTGGTCA TATTATATCA AGAGATGCCC TGAATAAAAT GTTTAATGGT AGCAAATTAA AATGTCCCTA 000320 000321 CTGTCCAATG GAACAAAGTC CAGGAGATGC CAAACAGATA TTTTTCTGAA GAGATAACTT TAGTTTGCAA TTTGTAAGTG 000400 000401 AAACTGAATC GTGGGTGCAT TTCAGAAGAG AACGTTCCAT ATAATGCAGC TAACCAAGGA CTCCTGTGTT TCTATAAGCT 000480 000481 AATGCTCCAG AAACTTTGCC AACCTGTTAG TGTACACACA CTGAGGGGAG TGCTCCCGGT GAATATTATC ATAGG |
Predicted Small Protein
Name | NONHSAT072120_smProtein_311:376 |
Length | 22 |
Molecular weight | 2454.8703 |
Aromaticity | 0.047619047619 |
Instability index | 63.5857142857 |
Isoelectric point | 10.9160766602 |
Runs | 5 |
Runs residual | 0.00816326530612 |
Runs probability | 0.0148383677795 |
Amino acid sequence | MSLLSNGTKSRRCQTDIFLKR |
Secondary structure | LLLLLLLLLLLLLHHHLEELL |
PRMN | - |
PiMo | - |