NONHSAT072150
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072150 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
776 nt |
Genomic location |
chr2+:87755094..87882848 |
Exon number |
5 |
Exons |
87755094..87755164,87769669..87769823,87779742..87779914,87820726..87821030,87882777..87882848 |
Genome context |
|
Sequence |
000001 CTGAGCCCGT GCCTGTCTTC AGATCTTCAC AGCACAGTTC CTGGGAAGGT GGAGCCACCA GCCTCTCCTT GCCCTAGCAG 000080
000081 ATGCTAATCC AGCGTGCGTC CTGACAGAGG TTGAAGGGGG CTTCTCAAGT CCCAGGTCCA GCTTGGTGTG GTTCAGCTAC 000160 000161 TCAAGAGACA TCTGCTGCTA ATGGATGAGC AGTCAACCTG GACGCAGGAA ATCATTTTTT ATTTGGACTC ATGCCCAAAG 000240 000241 TTACGGAGGA CCCAGCAACC ATCTCCTGCA GCCCCTGGAA ACCTCTTGAC TCTTCTGTGA TGTCCCCAGT GATCCAGCAG 000320 000321 CCCTGGCCTT CTTTTGATGG CTTGAACATT TGGTCTTCAT TGAACAGTTT GTATATTGGA AACTTGCCAG CCTCCATCCA 000400 000401 ATAACTGGGA GATGAAACAG GAAGCTCTAT GACACACTTG ATCGAATATG ACAGACACCG AAAATCACGA CTCAGCCCCC 000480 000481 TCCAGCACCT CTACCTGTTG CCCGCCGATC ACAGCCGGAA TGCAGCTGAA AGATTCCCTG GGGCCTGGTT CCAACCGCCC 000560 000561 ACTGTGGACT CTGAGGCCTC TGCATTTGCG GGTGGTCTGC CTGTGATATT TTGGTCATGG GCTGGTCTGG TCGGTTTCCC 000640 000641 ATTTGTCTGG CCAGTCTCTA TGTGTCTTAA TCCCTTGTCC TTCATTAAAA GCAAAACTAA AGAAACAAGC AAAGTGGATC 000720 000721 AGCAAAGGCT GCAGTCACCA GCATCTTTTC CAACCTTAAT GAACTGTATC CTCAAA |
Predicted Small Protein
Name | NONHSAT072150_smProtein_230:403 |
Length | 58 |
Molecular weight | 6245.0729 |
Aromaticity | 0.0877192982456 |
Instability index | 89.998245614 |
Isoelectric point | 4.22552490234 |
Runs | 8 |
Runs residual | 0.0135964912281 |
Runs probability | 0.0313107224871 |
Amino acid sequence | MPKVTEDPATISCSPWKPLDSSVMSPVIQQPWPSFDGLNIWSSLNSLYIGNLPASIQ |
Secondary structure | LLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLEEHHHHLLEEELLLLLLLL |
PRMN | - |
PiMo | - |