NONHSAT072177

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT072177

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2084 nt

Genomic location

chr2-:88422548..88427560

Exon number

4

Exons

88422548..88424105,88425695..88425867,88426004..88426265,88427470..88427560

Genome context

Sequence
000001 TGAAGAGGGA GCTCTATTGC CACCATGAGT TTCTCCGGCA AGTACCAACT GCAGAGCCAG GAAAACTTTG AAGCCTTCAT 000080
000081 GAAGGCAATC Ggagggacct agcttggaag atcaactctc tggtcaccAG GGGTATGGGG AATGAAATGC TCACACTCCA 000160
000161 AGAGCAAAGT CATCAAAGGA GGAGGGAATG AGGAAGGAGA GTGAGCAAGA ACCAGGGTGC TTACAAGAGG AACGGTTCTT 000240
000241 CAGGCCAGAA GAGTGTCCTT TTTATAAATT GACTGGCAAG ATAGCAGCAG GCCAGGCCAG GTCACTGTCC CTTCCTTTCT 000320
000321 GAGGCCACAG CCGATGCTGC TGACAAGCCC CCAGTCTGCC GGAAGAGCTC ATCCAGAAGG GGAAGGATAT CAAGGGGGTG 000400
000401 TCGGAAATCG TGCAGAATGG GAAGCACTTC AAGTTCACCA TCACCGCTGG GTCCAAAGTG ATCCAAAACG AATTCACGGT 000480
000481 GGGGGAGGAA TGTGAGCTGG AGACAATGAC AGGGGAGAAA GTCAAGACAG TGGTTCAGTT GGAAGGTGAC AATAAACTGG 000560
000561 TGACAACTTT CAAAAACATC AAGTCTGTGA CCGAACTCAA CGGCGACATA ATCACCAATG TAAGTTGGTG GTGCTCTGAG 000640
000641 CGTGTGGCTC CCAGTGCTTG AGGGGAGAGG GGAGGTGAAG CATGGGGAGC GGCTCACATA CCCTAATGCC ACCCCTCCAC 000720
000721 CCTCCAACCC CCAAACTTCT TTCCTGTGGT CAGTATCTGC CAGCACTTAC TGAGGATCCA TCATGTCCCA GGCAGTTTAC 000800
000801 ACACATTATC ACTAATCCTT TCTGCTCAGC GCAACCAACC AGCCACAGAG GCCTCCACCT GCCCTGCATG CCCAGGGTGC 000880
000881 TTCATAAATG CCTTTGCCCA TTTAGCGTTT ATAAAGAGAA TCCCATTCAT GGTCATATTA TGGCAGCTTA CAAGCCTGGC 000960
000961 ACAGTCCAGT TATGCAGTCA GCCTTGGTGC CTGGCTGCCA GCCACATCCT GTACCCTATT TGGGGGTGAA TGGTGCAGTG 001040
001041 TTTCTCCTGC AGGTATGTCC CCCTGACTCT TCTTTGCCCC CAGAATATGC TTTAGGGAGT CACAGACAAC AGAACACTGC 001120
001121 CTCAGGGCGC TGTCATCACT CTATTCAAAT GGAAAAATTC TTAAACTAGA GAGAGTGTGA GCATCAACCA CCCAATGTGC 001200
001201 AGTTTCCACC TCCGCCCCAG CACATTCCCA GGAGAGCAGG GGAGCAGGAG ATGAGCTATC CTGCAGTaag tcctggccaa 001280
001281 cgccctttga taggttccat ctcacctaat cctcctgtct ccttcgaggg aggctggatg agggattcaa tagacaggtt 001360
001361 gacctgtcca agtcatcagc taataaatgt taaatccagg gctcaaaccc aTCAAGCAGC AACTATTGCA TTGCTGCTGA 001440
001441 AACTGAGGGG CTCCTTTTCA CCCTGATGAC ATGGTATGTC ATTCCAGCAG TCTTATTCAA GAGAACTGGC AGGGGTGGAG 001520
001521 GAAACATCCT TAAAAACTCA AAAGCTGATG CATCCACTGT TTTTATATGC TTCACAGCTA TAGGAGGACA ATTATGCACT 001600
001601 ACCCACTGCC TTCCAGGCTG TGtgcctagt tgtgtccatg tacatgtatc cttggtgctc aacatgtatt tggtgcatag 001680
001681 taggtactca atgaaatttT GAGAAATTAG ATTGGGCTGG TTTGGATGGT CTTGCTATAA CAGTCATTGA TGTAGAAAAG 001760
001761 AATTCAGTCA AAGGCAGGAG GACTTTCCAG GTGAGGAGGA GAAGTGACAA AGACTTGGCA TAGGATTTTG GAAAACATTG 001840
001841 CCAACCTTTC CTCCGGTCCT ACAGGAAACC AGACGAATTT TTGAATTGTT TCATATGCCA ACATATTTGG TGCTGTTTTT 001920
001921 TAAGCTTAAT TTTGTTTTTT ATGCTTAATT TTGTTTTTTA CAATACAACA TCAGATGAAC ACTTCATAAT TTCTTTTCTG 002000
002001 GCTTTCAGAC CATGACATTG GGTGACATTG TCTTCAAGAG AATCAGCAAG AGAATTTAAA CAAGTCTGCA TTTCATATTA 002080
002081 TTTT
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Predicted Small Protein

Name NONHSAT072177_smProtein_1250:1465
Length 72
Molecular weight 7685.7799
Aromaticity 0.056338028169
Instability index 61.0549295775
Isoelectric point 10.2744750977
Runs 9
Runs residual 0.0217939214233
Runs probability 0.0374982825964
Amino acid sequence MSYPAVSPGQRPLIGSISPNPPVSFEGGWMRDSIDRLTCPSHQLINVKSRAQTHQAATIA
LLLKLRGSFSP
Secondary structure LLLLLLLLLLLLEEEELLLLLLLLLLLLEELLLLLLLLLLLLLEEEELLHHHHHHHHHHH
HHHHHHLLLLL
PRMN -
PiMo -