NONHSAT072199
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072199 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1048 nt |
Genomic location |
chr2-:88829463..88838833 |
Exon number |
2 |
Exons |
88829463..88830278,88838602..88838833 |
Genome context |
|
Sequence |
000001 GTAGAATTCA GTGGGCAAAG TTGTGAGCCA TCCTCAGGAA TGTCTGTCTG GGTCACTTTA CCTGATATTG CCAGGTACTG 000080
000081 ATAGCTTCCT TGCTCCCTGC CTGGAGCCTG AAGCTGCTGG GGGCAGTTAC AGAAGACAAC TGGAGCCCTT CTGTCTCTTT 000160 000161 CCTGTGCGGG CCCTTGGAAA ACCGCTGCTC TCTCTCACCC tcattccttc cttcaatatt tgttgagcac ctttctggag 000240 000241 gctggaaagt ccaagttcaa ggtccagcag ggtttggtct ctggtggggg ctctcttcct ggcttggaca cagctgcctt 000320 000321 cagagtgtcc tcccatgacc attcctcagt gcatgcacat ggatggagaa atctctttct cttcctcttc taataaggat 000400 000401 gcctattaga agaggtgtgg aataaggctc tactcttatg acctcaatta accttaatta cctcctaaaa gctttatctc 000480 000481 caaatacaat catatcgggg gttagagttt caacatatgc atttgtggga tacataattc agcccatagc atccaccttg 000560 000561 gacccagaga tagaagccac AACAAACATG TTCTACCCTC CTAactgtct acctctgaac tattagacaa tagagaaata 000640 000641 aactagcatg ttggtcaagc tactgtgttt tggttctctg ttatagcagA CTCACTGACT CACACGTATG TATGTTTACA 000720 000721 TGCATTCCAC TGAGCAAGAA GAAAAGTATG AAACAATGCC CTTTAAACTG TTGCTGTTGA TTGCTACAAG GTAGGAGTGG 000800 000801 TGGATGAACT GAAATAAGAA TATCGAGGGG AAAAGTTATC CAACAGCACC TCAGGTTTTG CGATCACACC CAATAGCTAG 000880 000881 ATGACTGCGG GAAACACACT TTTCCCCACT TTTTAAATAA ATGCTTAAAA CAGTAAAAAT CTTTACAACA GGACTTTCGT 000960 000961 TTTCCCCCAa gaccgagtct ctcactgttg cccaggctgg agtgcagtgg cgcgatctca gctcactgca acctctgcct 001040 001041 tctgggtt |
Predicted Small Protein
Name | NONHSAT072199_smProtein_437:625 |
Length | 63 |
Molecular weight | 6868.8967 |
Aromaticity | 0.112903225806 |
Instability index | 44.5856451613 |
Isoelectric point | 4.67706298828 |
Runs | 7 |
Runs residual | 0.0407373271889 |
Runs probability | 0.0951750069398 |
Amino acid sequence | MTSINLNYLLKALSPNTIISGVRVSTYAFVGYIIQPIASTLDPEIEATTNMFYPPNCLPL NY |
Secondary structure | LLLLLHHHHHHHLLLLLEEEEEEEEEEEEEEEEEELLLLLLLHHHHHHLLLLLLLLLLLL LL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL LL |
PiMo | iiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooooooooooooooooooooo oo |