NONHSAT072373
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072373 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1145 nt |
Genomic location |
chr2-:91874128..91900136 |
Exon number |
10 |
Exons |
91874128..91874228,91884477..91884690,91885970..91886022,91886530..91886639,91887621..91887747,91887970..91888134,91893844..91893948,91894141..91894242,91899772..91899888,91900086..91900136 |
Genome context |
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Sequence |
000001 AAAGGCTTGC TGATAGCGTT CACAGTGACA GCCCGAAAGT ATGATTCTAA GGGCCATGGG TCTGGATTTC CAGGAAAGCG 000080
000081 GAGACCTCGA GGTGCAGGAC TGTCGGGGCG AGGTGGCCGA GGCAGGTCAA AGCTGAAAAG TGGAATCGGA GCTGTTGTAT 000160 000161 TGCCTGGGGT GTCTACTGCA GATATTTCAT CAAATAAGGA TGATGAAGAA AACTCTGTGC TCGATATGGT TGTGTTGTTT 000240 000241 TCTAGCAGTG ACAAGTTCAC TTTGAATCAG GATATATGTG TAGTTTGTGG CAGTTTTGGC CAAGGAGCAG AAGGAAGATT 000320 000321 ACTTGCCTGT TCTCAGTGTG GTCAGTGTTA CCATCCATAC TGTGTCAGTA TTAAGGTGTG TTTGGTGCAG ACACTGTGGA 000400 000401 GCAACATCTG CAGGTCTAAG ATGTGAATGG CAGAACAATT ACACACAGTG CGCTCCTTGT GCAAGTTTAT CTTCCTGTCC 000480 000481 AGTCTGCTAT TGAAACTATA GAGAAGAAGA TCTTATTCTG CAATGAAGAC AATGTGATAG acagagtctt gctctgtcgc 000560 000561 caggctggag tgcatcggcg ctatctcggc tcactgcaaa ctccacctcc gcctcctggg ttcaagcgat tctcctgcct 000640 000641 cagcctccgg agtagcaggg actacagATG GATGCATGCA GTTCGTCAGA ACTTAAATAC TGAGGAAGAA GTGGAAAATG 000720 000721 TAGCAGACAT TGGTTTTGAT TGCAACATGT GCAGACCCTA TATGCCTGCG TCTAATGTGC CTTCCTCAGA CTGCTGTGGA 000800 000801 TCTTCACTTG TAGCACAAAT TGTCACAAAA ACCCACCCAA GACTTATACC CAGGATGGTG TGTGTTTGAC TGAATCAGGG 000880 000881 ATGACTCAGT TACAGAGCCT CACAGTTACA GTTCCAAGAA GAAAACTGTC AAAACCAAAA CTGAAATTGA AGATTATAAA 000960 000961 TCAGAAATAG CGTGGCCGTC CTTCAGACAC CTCCAGACAT CCAATCAGAA CATTCAAGGG ATGGTGATAT GGATGATAGT 001040 001041 CGAGACACAG CCGCTGTCGC TGCCATCTGG CGCGCCGCAG ACTCCCGAGA ACAGCCCTGG CTGTCAGCGG GCACCAGCCG 001120 001121 CTTCCTGTGC CCATCGCGTA GACTG |
Predicted Small Protein
Name | NONHSAT072373_smProtein_671:868 |
Length | 66 |
Molecular weight | 7179.2261 |
Aromaticity | 0.0307692307692 |
Instability index | 58.2215384615 |
Isoelectric point | 5.45330810547 |
Runs | 9 |
Runs residual | 0.0118269230769 |
Runs probability | 0.0480186068422 |
Amino acid sequence | MHAVRQNLNTEEEVENVADIGFDCNMCRPYMPASNVPSSDCCGSSLVAQIVTKTHPRLIP RMVCV |
Secondary structure | LLLEELLLLLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEELLLLLLLL EEEEL |
PRMN | - |
PiMo | - |