NONHSAT072458
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072458 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
547 nt |
Genomic location |
chr2+:95691422..95710378 |
Exon number |
2 |
Exons |
95691422..95691630,95710041..95710378 |
Genome context |
|
Sequence |
000001 CTCTTAACCC GCGCGCGGGG GCGCCCAGGC CACTGGGCTC CGCGGAGCCA GCGAGAGGTC TGCGCGGAGT CTGAGCGGCG 000080
000081 CTCGTCCCGT CCCAAGGCCG ACGCCAGCAC GCCGTCATGG CCCCCGCAGC GGCGACGGGG GGCAGCACCC TGCCCAGTGG 000160 000161 CTTCTCGGTC TTCACCACCT TGCCCGACTT GCTCTTCATC TTTGAGTTTg tgatgacaat gttccaagat tgactgtggt 000240 000241 gatggacgca cgtatctgcg aatattctga aaaccaggga atcataccct ttcaatgggg gaactgcatg ggctgtgaat 000320 000321 tatagctcat aaagctgttt aagaaAAGAA AAAGATAATG TCTCCCCACC ATCTCACTAT GAAACATACT GCTATAAATA 000400 000401 TACCATGCAA AGGAAAAAAG TCGGCCTCAT TTTTTAAAGG ACTCACTTGC AAGGTGATGC CCCCAGAGGC TGGGTGGGGT 000480 000481 CCTGAGATCT GTCAGGAGCT GGGGTTAAAC CCATAGTGGG CTTTGTTCTA TGGACAACTG TGGACAA |
Predicted Small Protein
Name | NONHSAT072458_smProtein_116:232 |
Length | 39 |
Molecular weight | 4059.6766 |
Aromaticity | 0.157894736842 |
Instability index | 41.6657894737 |
Isoelectric point | 3.76751708984 |
Runs | 5 |
Runs residual | 0.0410318559557 |
Runs probability | 0.0114644055821 |
Amino acid sequence | MAPAAATGGSTLPSGFSVFTTLPDLLFIFEFVMTMFQD |
Secondary structure | LLLLLLLLLLLLLLLLEEEELLHHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL |
PiMo | ooooooooooooooooTTTTTTTTTTTTTTTTTTiiii |