NONHSAT072459
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072459 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2378 nt |
Genomic location |
chr2-:95711632..95714009 |
Exon number |
1 |
Exons |
95711632..95714009 |
Genome context |
|
Sequence |
000001 AGGCTCAGCC TTGGAACATG GTGGGGTGAC ATCTACGGAG AAGTCTCACC TGGCACTGGA AAAGCCCATC CTACTGGGCC 000080
000081 AGGGACCAGT ACTTCCTGCG CCCCCCTACA ACCAGCAGCC ACCCTGGGCT GGACTCACCA AGGTGACCCA GGAAGTCTCT 000160 000161 CCACCGTGGG CTCCAATTAT GTACAGGATG ATCAAGGTGG TGGTGGCCAC GAAGCAGAAC ACAGACACGA ACATCACCCA 000240 000241 GCCCTGGACC AGGGGCCAGG GCACCAGGGA GGAGGCCACC AGGATCCACA CCAGGCCCCC GAAGATCTGC GGGGGAGGAG 000320 000321 GAGGGGTGAG TTTTGGCCTA GAGGAGAGCC CCAGCCCAGG AAGGGCCCCC GACCAGCGGT CACATGGGGT GACTGGAGTG 000400 000401 CAAAAACACA GGAAGCAGGC AAAGAGAACA GGGCAGGCAT TTTCCTCTGC AAAAATGCAT CTTTAGTCCC CCCAGGGCCC 000480 000481 TGTGCTGGAT CTCAATCCCA ATCCCCGGCA CGCTTGCCCT GATTAACTTT TTAAAACTTT TTTTTCTTGA GACAGAGTCT 000560 000561 TGCTCTGTCA CCCAGGCGTG AGTACAGTGG CGTGTGGCTC ACTGCAACCT CTGCCTCCTG GGTTCAAGTG ATTCTCATGC 000640 000641 CTCAGCTTCC TGAGTAGCTG GGATTACAGG TGCATGCCAC CATGCCCAGC TAATTTTTCT ATTTTTGGTA GAGACGGGGT 000720 000721 TTCACCATGT TGGCCAGGCT GGTCTTGAAC TCCTGACCTC AGGTGATCTG CCCTCCTCAG CCTCCCAAAG GGTTGGGATT 000800 000801 ACAGGCGTGA GCCACTGCAC CTGGCCTGAG TAACTTTTTA AATATGGGTT TAATTTTTTT ATTTAACAAA CACTTATATC 000880 000881 AGACCTACAT TCCAGGCACT ATCCTAAGCA CTTTACAAAT AATAACTCAG TGATTCTCAC AGTAACCCTC TGAGCAATGC 000960 000961 TGACCTGTTT GCCAGATGAG GAAACTGAGG TAGGTGGAAG TTAAGTAATT CATCATTCTG AGAAAGGATT TATGCCATTT 001040 001041 GGTATTGTCA TGAGAAGAGC TGCTATTTCT TCTGATATTC TAGCCCTCCT ACTTGCTTTG ATATTAAAAT GTCCTTTCCT 001120 001121 TTATGCAATG GTAGTGACCA GCAGATCTTT TTGGTCTTTA TTTGGCAAAA CAAATTAACC ACACTGTCAG TAGTCCCCTG 001200 001201 CCCTGCCCTT CCTTTCTTTC TCTCTCTCTC TTTCCTTCAT TTCTTCTTCC CTCCCTCCCT CTCCTTCCTT CCTTCTTTTT 001280 001281 CTTTCTTTCT TTCTTCTTTC TTTCTTTCTT TTTTCTCTTT CTTTCTTTCT CTTTCTCTCT TTCTTTCTCT CTCTTTCTCT 001360 001361 CTCTCTCTTT CTTTTCTCTC TCTCTCTCCC TTTCTCTTTC TCTCTCTCTC TCCCTTTCTC TTTCTCTCTC TTTCTTTCTC 001440 001441 TTGCTCATTA TTTCTTTTTC TGGATTCAAC TGTTTATATT CCCAAGTCCA GGAAGTGTTC TGATGATCAG ATTTGGAGTT 001520 001521 GGAATGGAGT AACCAAGGAC AGCCTTGTCT CTTTGGATGG CTGAGGATGG GCATGAGGAA AGTACAGTCC CGTGGTTATC 001600 001601 CAGAATACAC CCCAGTTGAT GTCGCCAGGG TCAGTGAGCC CCATACAGTC AAAGAGGAGC AGACATGGGG GCCAGTAGCA 001680 001681 CCCCTCAGTA GCCCAGCCCC GCTCCTCGCC GTGGATGGAC ACATACAAAC CCGCTCCCCA CCGCGGATGG GTACGTACAA 001760 001761 ACTCCGTTCC TCACTGTGGA CAGGCGTGTA CAAACCCCAG CGGGGACTTT CTGCACTTCT CTTTCCCTTC TCCTCATCTC 001840 001841 CCCCAGCGCC ACCCCCACCC AGTAAGAATC AGCTCAGCCT CATCCACATG TTCCCCACTT GGATGAGGAC TGGGCTCGAA 001920 001921 GCACTCCAGG CCTATGTGGA GATTCCTTTG CAGCCAAAAG TCTCCAAGGT ACTACAGAAG TGTCTGGGGG GCTGAGGATG 002000 002001 GGGCTGCCCT CCCAGGCCTA TGTCCCCTGT GGTTTGAATT CACATAGCAC CTTGACCCCC CCACCTCCCT GCACCTGCTG 002080 002081 CCCACCTGCT GGGTGAGAGA TACCGCTGTC TTCACAGGTG TTCTCTGAGC TGCTTGACTG AGAAGCAATC AGGAGAGAAT 002160 002161 TGCATTTGGG TAGAAAAATC AGTGCAATGA AGACTTTGGA TTTATTAAAA CCAAGTTGTC CCTAAGGAAT CAGATGTGGG 002240 002241 CATCTCTGAC CAGAAAGCGT CCTCTGCTGA TGGATCTTAG GTTGCCTGAA GGCACGTGGC AGGGCCGGTG GGATGCACTG 002320 002321 TGCATCTTAC AAAAATGGGA GCAAAATCAA TTAAATAAAA ATGCCCAGAC CACCATGG |
Predicted Small Protein
Name | NONHSAT072459_smProtein_1031:1177 |
Length | 49 |
Molecular weight | 5363.5172 |
Aromaticity | 0.125 |
Instability index | 59.5083333333 |
Isoelectric point | 10.2949829102 |
Runs | 7 |
Runs residual | 0.0197368421053 |
Runs probability | 0.0401746284099 |
Amino acid sequence | MPFGIVMRRAAISSDILALLLALILKCPFLYAMVVTSRSFWSLFGKTN |
Secondary structure | LLLLHHHHHHHHHHHHHHHHHHHHHLLLLEEEEEELLHHHHHHHLLLL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL |
PiMo | ooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii |