NONHSAT072486
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072486 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1591 nt |
Genomic location |
chr2+:96080756..96082345 |
Exon number |
1 |
Exons |
96080756..96082345 |
Genome context |
|
Sequence |
000001 TATACCACAC CCCACAAATG TTGCTTATGT TTCCTTGGTC ATTCTGTCCA TCCTCCTGTC TGTCCAAAGC CAAGGACACT 000080
000081 GCTCTACTCT AAATTTTTTG TCCCGAAGCC CCCAAATACT GCAACCCTGA CCCAATGCAC GAAGCCACCC CAAAATACAG 000160 000161 CAGAGGACAC CAGGACTTTC ATTTTCCCTC AGTATGGCCC ATCCTTTGGG TATGCCAACT CCATGTCCAC CAAGCACTGC 000240 000241 ATGTAGGACA GGGCACAGTT TGGAGGCCTT GGTCCAGCCA CTGCCCCAGA CCCACCTTGG CTCTCTCCTC ACTAACACCC 000320 000321 GAGAAGCCCA GACTTCCCAG TGTTTAGCAA CAGATTAAAC TCTAAGCCAA CAACAACAGA ACAGGGTGGA GTGAGTGGAA 000400 000401 AGCAAATGAA ATGTTAAAAA AAAAAAAAAA AGCAATACTT GCATTCTCAT TAGTAGGAAC ATGTGAGATG AAGCATGTTA 000480 000481 TGTTATTAGG CATTCTCTTG ATTCGGTAAA CACAAGCTGA ATAAATTTAT AAATATCAGC ATTAAGCGAG ATTTAACGGG 000560 000561 GAGCTGTTTA TCTTCTGCCT GTCAGGCAGG CGGCAACACT CTCCATGTAT CACTCGCCAG CCGTGCAGTC CTCACTCTCT 000640 000641 TGCCCAGGTA AGCTGGGGAA GAGCCTGCTG CCGCCCAGCT CTGGTTGTGG AAGGGCTGGC ACCAAGGAGC TGCGAGCTTA 000720 000721 CCTCAACTCA TCTCACCTCA CCATGCCGGC TGCGAGGCGG CCCGTGCAGT CCGTGCGCAG GAGGTCACAC TCCCATGCTG 000800 000801 CATCCCAGCC CCTCCAGAAG CAGAGCATGA CCTGGGTGAC TTTGAGGATG CTATTTAACC TCTCTAAGCT AAAGCTCCTC 000880 000881 GACTGCAGCA TCAACAGATC AGTGCCGACC TGTTAAGGCC GTCGAGAGCA TCAAATGCTA CTGTTCAGCA GGTGCCTGAC 000960 000961 ACATAGTAGG TCCACAAGCA AATGATTTTC CTGCTTGCAT CATTTCTAGC ACAGAGCTGG AGGAAATGGC GAGGTGCAGG 001040 001041 TGGCCGCTGG GCCCTGCTGT TCTACATGGG AGCAAGACAG CTGCTAGGTG AAGGGGAATG ACCAGGCAGC CACAGGGAGG 001120 001121 ACATGTGGCC TCAGGAAGCC TGGGTGTGTA TCCTGGTTCT GCTAGGAACA CGTGTGGGGC TTTGTGTGGG TGACTCTCTG 001200 001201 GCTCCCCAAG CCTCCCTTTC CTACTGTTAT ATCCTTAAAG TGCCTCTGAG GCCAAAGCCT TTGTGGCAAT TGTCAAATGA 001280 001281 GTCCATATGC AGTGAGTACC GTGTTGAGGG AGGACAAGGT CACCAAGAGC TGAGAATGTT TCTCCGACTG ATGAGACCTA 001360 001361 GATATTGGGT ACATGGAGGT CCCCGGTCCC TTTGTGATTC CTGCAGCCTG TTGCCTCCTT GCCTGGACCC CGCCTCAGCT 001440 001441 CAGAAAGCCA ATTCCCTAGA TTCCAAAGGC CTTCCCAGAC CAATTAGCAT GTCCTGCAGC TGTCAGCTCC CTGTGCCTAG 001520 001521 CCTGGACCTC AGCTCATGTC TAGCACCCAG TCTCCCAACC CCACACATAT TCACAAATAA AAGAAAATAA C |
Predicted Small Protein
Name | NONHSAT072486_smProtein_134:346 |
Length | 71 |
Molecular weight | 8057.1801 |
Aromaticity | 0.1 |
Instability index | 44.7928571429 |
Isoelectric point | 9.38262939453 |
Runs | 8 |
Runs residual | 0.0305516265912 |
Runs probability | 0.0352963257375 |
Amino acid sequence | MHEATPKYSRGHQDFHFPSVWPILWVCQLHVHQALHVGQGTVWRPWSSHCPRPTLALSSL TPEKPRLPSV |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHEEELLLLEEEELLLLLLLLLLLEELLL LLLLLLLLLL |
PRMN | - |
PiMo | - |