NONHSAT072745

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT072745

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1752 nt

Genomic location

chr2+:99797674..99813862

Exon number

5

Exons

99797674..99797712,99811214..99811360,99811579..99811652,99812036..99812485,99812821..99813862

Genome context

Sequence
000001 TCGGAGGAAA ATTTCAGGCT GAAGGTTTAG CGGGTGCCGG TGTTTCAGGC CTCACCTGAA GATCATGAAA AATACGGTGG 000080
000081 GGATCCACAG AACCCTCATA AACTGCATAT TGTTACCAGA ATAAAAAGTA CAAGAAGACG TCCATATTGG GAAAAAGATA 000160
000161 TAATAAAGAT GCTTGGATTA GAAAAAGCAC ATACCCCTCA AGTTCACAAG AATATCCCTT CAGTGAATGC AAAATTGAAA 000240
000241 GTAGTTAAGC ATTTGATAAG AATCAAGCCC TTGAAGTTGC CACAAGGACT TCCAGCAGAG GAGAACATGT CTAACACGTG 000320
000321 CCTCAAAAGC ACTGGGGAGT TAGTAGTGCA GTGGCATCTG AAACCTGTGG AGCAGAAAGC ACATGAGTCC TAATGCCCCA 000400
000401 GCAGCTTCCG ATTGGAAAAT GCAAATTGTT TTTATTTAAA GATGGTGAGA AAGTGTTTTC ATTAAAATAT GTTTTCAAAA 000480
000481 CCATTTTCAg gccgggcacg gtggctcacc tgtaatccca gcactttggg aggccaaggc gggcagatca cctgaggtca 000560
000561 agagttcgag accagcctga ccaacatgga gaaaccccca tctctactga aaatacagaa ttagccaggc atggtggcac 000640
000641 atgcctgtaa cccagctact cgggaggctg aagcaggaga atcacttgaa cccgggaggc agaggttgca tggcatgatt 000720
000721 tcagttcact gcagcctcga cctcccaggc tcaagtgatc ctcccacctc agcctccaga gtagctagga ctacaggcag 000800
000801 tgtgccacca catccagcta attttttaaa gttttttcat agagacaggg actcactatg ttgtccaagc tggtctcaaa 000880
000881 ctcctgggtt caagccatcc tcccacctca gcctcccaaa atgctgggat tacaggcatg agccactgta cccagccAAA 000960
000961 ATTGTTTTCT TTTTTAAGTG Aattcaacaa tttctgtgag tggctctttg catgaacact gtgcaaggtg ttggagaaat 001040
001041 ccaaagctga ccaaaacatg gtccccacct tttggagctt acagtctgtt ctggggaaca gagattcagc caaaGTCAAG 001120
001121 AAACACTGGA TGCCAGCTAG ATTATCTGTT CTGTGCTTTG GTGTCTATAA GTACATATGT GGATATGGGT TCATTTTATC 001200
001201 CCTAAACTTA GTACCAAACC AGCATTTAAT ATCTAATTAT AAATCTAATT TGGCCTAAAC TTTATTATTG CACACTGCCT 001280
001281 GAACAAAACC TATTTGTCTC TATGTAAATT TTTTCCTCAT GGAACAAGGG TGTGAAATGA AAATATTTTA GGATTTATTC 001360
001361 AAAAACAGAC TATTCTGTTT TCAGCTTCAG AATTGTTCTT TGAATCCTAA GGAACCTCTG TCAACAGTTG AGGTTGCTGT 001440
001441 TGAAAAGAAA GAAGAAGGAG GCGGAAATCT CTCAGGGAGA ATTATTTCCT TTCTTTTCTA TTTTAGATAC CTGGAGGGGT 001520
001521 GGGGAGAAGT AAGAATTGTA AGGGAGGTTC AGTAGTGGGG AATTCTGTGA CAGCTGATTG AAGATGATGA TGAAGAACCT 001600
001601 CTGCATTCTA GTTACCCTTT GCTTCCCTTC ACCTCTTGTA AAATTTGGCT TGGCAACAAT GACATTGTCA TGCTTATTGT 001680
001681 CCCAATATCC ATCCTGTCGT AGATCTTAAT GTTTTTGATC GTTGCGTTAA AGTGGAAGTG CCACCCACAG TG
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Predicted Small Protein

Name NONHSAT072745_smProtein_1583:1708
Length 42
Molecular weight 4598.6929
Aromaticity 0.0731707317073
Instability index 85.5390243902
Isoelectric point 9.24627685547
Runs 6
Runs residual 0.0296274128385
Runs probability 0.0264382029088
Amino acid sequence MMMKNLCILVTLCFPSPLVKFGLATMTLSCLLSQYPSCRRS
Secondary structure LLHHHHHHHHEELLLLHHHHHHHHHHHHHHHHHLLLLLLLL
PRMN LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
PiMo oooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiii