NONHSAT072783
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072783 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1191 nt |
Genomic location |
chr2+:101222728..101225532 |
Exon number |
2 |
Exons |
101222728..101223787,101225402..101225532 |
Genome context |
|
Sequence |
000001 ctagaattta cctaagccca gaagaataaa aagtcacctg tgttttattc tggctttata ctgttttcat ttgttctgtt 000080
000081 ataatttttg tataagaaat ccaggaatct attttgcttc tgaagtggct gtccaatCAG GATTTACCTT TTACCACTTG 000160 000161 GTTGGAGAGG TGGGGGAAGA AGAGACTGGA GGAAATAGAA GCTGAAGACA GGACTAGATG TGTCTCCCTC CCCAGCCTCC 000240 000241 TTTCTCTGCA GAGGTGGAGG AATCACGGAA GCTATCGTGG CTTTAGGTGT TGACTTTTGT CAATGTTTGC TGAAGCCAGG 000320 000321 AGTGAAATTG AGACAATATT CCGATTCTTG GAACCTGAGT TAGCGTTAAA GGGGATGACA AACAGGCTGT TGTTAGGAGG 000400 000401 TAGTTCCATG TAATAGGAAG AGTTTCCACC TCCCTCAGAG GCTGCCTTTC TCGTTTCTCC AAATGATTTC GCGGTTGGCC 000480 000481 TAAGTTTCCT TTACTTCTCC CTACGATGGT GTAACATTAG CTTGAATGCT GACGCTATGT GGTGGTGAGC GGCAGTGGGT 000560 000561 GTATcttgcc cataaaccct tggaggacag tggaggacag ggactgacca actcacccaa gggtcctctg catgcacatg 000640 000641 gtccctgcac atggcacata gttggtgctc agaaggcctt tgctggaaca aaggaaAACA CAAGCACCCA CAGCAGTGAT 000720 000721 GGCTGATTTT GTCGGGTCTG CAATGGAGAT TAGTCACCAC TAGGTGTCAT GGTGAGTCAA GAAACATTTT GGCTCATGGT 000800 000801 TACAAATTAT GCGTTTACTG TATTCATCTT CGTGCATGCA CACATGCAAT GTTTTACAAA GCATCTGTTG AGTGTCTACG 000880 000881 GCACAACACA CACGTTCTGG TGCTGGAGAT CCTGCCCTGG CTGAGCTTCT GGACCTGGTG GGGAGAAATC CACAATGAGT 000960 000961 ACTGAGACGA CCGGCAAAAG CCCGGTGAAG GCACCTAGGA GTAGGGCCTG CTTACCCTGG AGGAGTCGGG AGCAGCTTCC 001040 001041 ACAGCAAGGA GGCTTCTAAG ATTTTTTGTT CTTTGTCAGC ATGAGTACCT GGGATCTTAC ATGTAGCCCC TGCATCATTT 001120 001121 CAGAAATGAT CTCCAGTGCC CAGGCTCTGA TGCCCAACAG ACCTGAAGTT ACATCCCAAC CTGAACAGGC G |
Predicted Small Protein
Name | NONHSAT072783_smProtein_848:964 |
Length | 39 |
Molecular weight | 4749.4279 |
Aromaticity | 0.210526315789 |
Instability index | 68.7002631579 |
Isoelectric point | 5.76446533203 |
Runs | 7 |
Runs residual | 0.0115997229917 |
Runs probability | 0.0337270043154 |
Amino acid sequence | MFYKASVECLRHNTHVLVLEILPWLSFWTWWGEIHNEY |
Secondary structure | LEEEEEHHHHHLLLEEHHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |