NONHSAT072903
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072903 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
722 nt |
Genomic location |
chr2-:104790467..104834366 |
Exon number |
4 |
Exons |
104790467..104790733,104795323..104795508,104795599..104795702,104834202..104834366 |
Genome context |
|
Sequence |
000001 GTAGAAGCCA TGCTGCCTTT TCTAACCTAA CCTCTGAAGT CATGCCATGT CACTTCTGCT GAGTTCCATT AATTAAAAAT 000080
000081 GAGTCACTGA GGGCCAGGCA CAGTGGCTCA TGCCTGTAAT CTCAGTATTT TGGGAGGCCG AGGTGGGCAG ATCACTTAAA 000160 000161 GTCAGAATTC ACAATAATAT AATAATCACT GGTAAAAGTA AGTATATTAT CAAATGCAGA ATAAGGTAAA ACTTTGAGTG 000240 000241 TCATGTAAAT AACATATCTC TAATAGAAAA GATAAAACGC AGGTAAAAGT AGTAACAGTA TAGTTTTGTA CGTGATTGAA 000320 000321 TTTATCAGCT TAAATAACCT GTCATAACTA TAATAAGTTT TATGTAGACT TTAAGGTAAG CAGAAAGCAA AAATGTATAG 000400 000401 GAGATCTAAA AAAAATACAA AGAGGAAGGA ATCAAAGCAT ACAACTACAG AAAATAGATA TGAGATGTTG AAGTCCTTAA 000480 000481 ACAGGTTGGT GGATTTGTCT ATTTGTCTAT TTGTCCTTTC AACTCTTAGT TTTTGTTTAG TGTATTTTGA GGCTCTGTTG 000560 000561 TGTGCTTGTA TGTATGCACA CATTTTTAAT AATTTATTTC TATTTTTTTA CTGTTACATA ATCTCTCTTT TTTTCTATAG 000640 000641 GGATATTCTT TGTTTTGAAT TTACTTTATT CTGACATTAA TATGTCACTT TTTCATTTTT AATTATTGTT TATATAATCA 000720 000721 GT |
Predicted Small Protein
Name | NONHSAT072903_smProtein_392:673 |
Length | 94 |
Molecular weight | 11355.3863 |
Aromaticity | 0.204301075269 |
Instability index | 51.0066666667 |
Isoelectric point | 8.97015380859 |
Runs | 6 |
Runs residual | 0.0664078056551 |
Runs probability | 0.0172967084732 |
Amino acid sequence | MYRRSKKNTKRKESKHTTTENRYEMLKSLNRLVDLSICLFVLSTLSFCLVYFEALLCACM YAHIFNNLFLFFYCYIISLFFYRDILCFEFTLF |
Secondary structure | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHH HHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTT TTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii |