NONHSAT072935
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072935 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
819 nt |
Genomic location |
chr2+:105320215..105321967 |
Exon number |
2 |
Exons |
105320215..105320265,105321200..105321967 |
Genome context |
|
Sequence |
000001 GACAGATCCA GGCAGCTGGT GAAAACTCAT GAATTCTCTG CAGCACAGAA GCAAAGAGAA GGTTCCACTG TAAGGAAATA 000080
000081 TCTTAGCACA TTCCAAAAGT GCATTTTTTG CAAGCTATAT TTTTAGACTA AACATATGTT CAATGATTTG CCCTCTCCAG 000160 000161 GGAGCAGGTT TGCATTCAGG CCACTGAGAC GACGGAGGCT GCATCACAGA AGAGGCCGTG GGAGGTCACA GGTACGGCCT 000240 000241 CTCCTTCTGA CTGTACAATG AACTCTGCAA GCTGTGTGGT CAGAGTGCCA GGGACAGCCA GGAACTGCTG TCATCGTTCC 000320 000321 AGGTGGAGCT GACAGACTGT CTCCGAAGCG CCCACCTGCG CGTGCGCCCC CTCTTCCCGG CACAGGCTAG AGATGCGCAG 000400 000401 AATCCTAACT ACGGCCACCG TTTCCTGCCT CAACGAGCCA TGCCCTAAAA GAAACAAATG CATCGCCCCA GAATTCTTAG 000480 000481 AAAGTTACAA TCATCTGCTT AACTCTTTTA ATTTCCTTTT CCTTCAACTT AAACTTTAAT TTCAGGTATC TTCTATACAA 000560 000561 CACAGAAGTC ACGCTCTGGA TAGAATTAAA AGGAAATTAA CTTGGGGTTT AGGGTGGACG TTTTTTGCCT TATTTTGCTT 000640 000641 CTTAGTAAAT GAAAGTGAAG CCTGAATAAT GAGAATATTA TTAATCCATC TCCATTTTTC TACTTTAAAG GCACAGCATA 000720 000721 GATTTTGGTT CCAGTTGTTA CTACTTTAAT GAGAGTAATG AATATTCCAT GTGAGGGCAG TGTGCATGAA AGTGTGCTGG 000800 000801 GAAAGTTCTA TGGATCTTT |
Predicted Small Protein
Name | NONHSAT072935_smProtein_392:538 |
Length | 49 |
Molecular weight | 5628.6155 |
Aromaticity | 0.104166666667 |
Instability index | 67.4895833333 |
Isoelectric point | 9.05645751953 |
Runs | 6 |
Runs residual | 0.0405701754386 |
Runs probability | 0.0414237767179 |
Amino acid sequence | MRRILTTATVSCLNEPCPKRNKCIAPEFLESYNHLLNSFNFLFLQLKL |
Secondary structure | LLEEEHHHHHHHLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |