NONHSAT072962
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072962 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
993 nt |
Genomic location |
chr2+:105474040..105475032 |
Exon number |
1 |
Exons |
105474040..105475032 |
Genome context |
|
Sequence |
000001 TGCCTAAAGA GATCCACGGA AACTTTATTT CCTGGGAGCG ACCTGAGAGA AAACAGAGGC ACCAGGTTCC ATCAGGGGAC 000080
000081 GACACCGTGC TCTGGGACCC TGTTTTTCTT GGCCATATTA AAGTCATTTG GAAACAAATC AACTCTGAAA TGGGAAGGAG 000160 000161 GGGGGAAAAA CAGTCTCCAA GAAAAAAATA ATTATATTGA CAGCTTCTGA AACTAACAGA CTGAATAGCA AAGCCAAAAG 000240 000241 AAAAGTATCC TCAAAGTAAC CTTGGAAATA AAAGGATCGG GAAGGAGCAG AGGGAGAGGG GGAACGTCCG CTGAGGAGTG 000320 000321 GCGAGAGGCC CCGGCCGAGT CGGGTCGCGG GCGGGCGGGC GAACTGGGAG CAGAGCGGGG GCCCAGCCAG CGAGGCCGCC 000400 000401 GAGCCAGGCC CGGCCGCGTA CCCAGGCTTT GACGGCTGCC ATTCAGGGTG GACGATGCCT AAAGATTCCA CCGCTAATAT 000480 000481 TTTTTTTATT AATATTTTTT ATTTTTTATT TCTGGACTGA CTCAGATAAA GGAATTTAGA AAGACTGAGC ACCAGCCGCT 000560 000561 GCACTTCTCT GGACTTCTCT CCTCAATCCG TTGCCAACTT TGATTGAATG GGTGCTGTGG ATGTGATTAT ATAATACTGC 000640 000641 CATTTCCAAG CAGTGTTTTT GGTAGGTTTT AATAAACAGA CTTTTCAAAA GACGGCAATA TAGAATTGTT AGATCCGTTG 000720 000721 TTGATCTAAA AATATTTGCT TTATATTTTC ATTAAATGAC TTCTTTTAAT ATTTTATTCA GAATACTTAT GAACTGCTGC 000800 000801 AAAACGGTAA TTTATTTTTC CCCAGATCTT GTATTACGTG TTTTTTTCAG ACGAGCACAA ATCAAAATGA AATGAAAATA 000880 000881 TGGACAGTTG TTAGGTAATA AGGGTATCTT TTGATGTGAT CATTTGATTG TAATTTAATT TGAGTAGTGA TTCCGTAAGA 000960 000961 GCTGATCGAG AAAATAAATT TGTTAGAATG AAA |
Predicted Small Protein
Name | NONHSAT072962_smProtein_755:874 |
Length | 40 |
Molecular weight | 4744.8221 |
Aromaticity | 0.153846153846 |
Instability index | 64.5512820513 |
Isoelectric point | 10.4531860352 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.0378782143489 |
Amino acid sequence | MTSFNILFRILMNCCKTVIYFSPDLVLRVFFRRAQIKMK |
Secondary structure | LLLHHHHHHHHHHHLLEEEEELLHHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLL |
PiMo | oooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiii |