NONHSAT072986
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072986 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1588 nt |
Genomic location |
chr2-:105950497..105952227 |
Exon number |
2 |
Exons |
105950497..105951525,105951616..105952227 |
Genome context |
|
Sequence |
000001 CTTGACACAG TAAGTGTTTA AGAACTGGTA GCTGATTTTT ACAAAGTTAT GGGTCATAGA AGGCAGTTTA GAGAAAAGGG 000080
000081 CAGGCTTTGG AGTAGCTCAG TTGTATTATA ACCTTGGCTT CTTTACTCAC CTAGGACATA CATTCTCTCT TTAGCTGTAG 000160 000161 CTTCCTCCCT TCTGAGATGG AAATTATAAG CCATCTCACA GTGTTGTGAG GATTGGAGCT CAAGTGTGTA AAATGCCTCC 000240 000241 TCTGTGGGCT CTCCTTGGAG AGTTCTTGTA TCCTATTGAT TGTCATCAAA GGAAAAAAGT GGCAGGATGA TGGCATAAGT 000320 000321 GGGAAGAACC TTGAGTTTAA TAGTCTGAAA AAGTGGTTAC AGGTTCTTGC TATGCTTTTC CTCTCTGTGG TTTTCTGAAC 000400 000401 CCATCGCCTA ACCTGAAGCC TTAAACTTCA TCTGCAAAAA TGTTTTGTGG CAGGTGACTC TGAAGCAGAA CTCTTGAGAT 000480 000481 GGAAGGATTG TCATCTGAGG AAAAAAAATC AAGATTAAGA GAGGAGGAAC TAGAATGAGA TTCACATACC GTCTCTCCTC 000560 000561 CAAGGGAAGG AGAGAGTGGT GATGCCTGCC CACTCCTTCC TGGGCAGAAC ATTTGTAGCA TGGAACATTG GAGAATTTGC 000640 000641 AGTCTGCTGA CTTTCTGATT TAGGAGGTTG ATGGGGAGGC CTTATAATTT GCATTTCTAA CAAGTTCTGA GGTGATGCTT 000720 000721 CAAGTATGTC CAGGCAGAAG GGCTGCCTCA CAGAGAATTC TGCCATACCA CATGGGAATT GAAGTCACAG ACATCTCTAA 000800 000801 CCCTCAAGCC TGAAACCAAA AGACTGAAAA CCAACACTAC AGTGGACAAA GAACATCTCT GAACTTGTGT GGGGACCAGT 000880 000881 GACACAAGGA CCTAAGGTCT CTCTCTTCTC ATCTTGGCAC TTCAGAAGTC TCCCCAATCT TGACAAAGCC CTGGAGAAAG 000960 000961 GGCCGGGCCT CCCGTTGATA AGAATATCAC TGCAGATAAA TGGAGGTTTC AAATTGAAAG AAAGGAGGAG GGCCTCCTGT 001040 001041 TGATAAGATT ATTGTCACTG CAGGTAAATG GAGGCTTCAA ATAGAAATAC ATTTCAGTTA CAGAAAAAAA AATTATCTTT 001120 001121 GTTACACATT TGAGTTTGCA GGCCTAAGGT TACTCCCGCT ACACTATCAT CTGTAACCAT AACGCACTCA ACATTTTAAG 001200 001201 CTAACTATAA GGATTGTTGC TTCACTCAAA GATCCTGAGG TTTTATTCAC TAACATTTTT ATTTGGTGAC TATAGTTGAC 001280 001281 AAGAACAAAG CTGTGGGGAA CCAACAAACA CTGCAATGCC TGGCATTGTC ACCTCACTAG ATTGTGAGTT CCTCTGGGAC 001360 001361 AGGGTCCGTA CATTTTCTTA GAATCCCTCA CTTAGCCATT AGCCTGCACA GTGCTTGTAC TTAGTAAGTG CTCAGTAAAT 001440 001441 GTTTGTGGAA TGAATGCATG ATGAACAAAA TATATACTGA GGACTCTTGG TGTTGATTCT TGTTGATAAT GTAATAGTTA 001520 001521 AGATATGTTA TAAATATGTT ATAAATATTG TATCAAAATA TTGTATCAAA AATATACTTG AACAGGCT |
Predicted Small Protein
Name | NONHSAT072986_smProtein_581:649 |
Length | 23 |
Molecular weight | 2453.837 |
Aromaticity | 0.181818181818 |
Instability index | 62.1772727273 |
Isoelectric point | 6.49822998047 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0446740858505 |
Amino acid sequence | MPAHSFLGRTFVAWNIGEFAVC |
Secondary structure | LLLLLLLLLHHHHHHLLLEEEL |
PRMN | - |
PiMo | - |