NONHSAT073162

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT073162

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2334 nt

Genomic location

chr2+:110744557..110752858

Exon number

3

Exons

110744557..110744767,110745138..110746379,110751978..110752858

Genome context

Sequence
000001 ACTCTTCTGC GGGAAGGGCT TGGCGTAGAC CGCGCACTGG AAGGCGTGCG CGCAGGTGTG CGTGACCATG TGCTTGAAAC 000080
000081 GGCAGTAGCG CAGCGAGAAG GATCGCCATC ACACGGCGCA CTGGTGCGGC TTCTCCCCCG AGTGGATGAA CATGTGCTTG 000160
000161 GTGTCGTTTT TCCTTGAGCT GAACGTCTTG CAACAGTGGC CGCACGCATA GCTGCCCCAG ATCCCGGAAG AAAATCTCTC 000240
000241 CCACACCACT GTAGTCAGAG AGGCCAGTGG GTGCATGGAA CTCCTCGCAC GCGCTGTCAG CAGCAGCAGT GAGGAAGCCG 000320
000321 GCAGCACAGT CTGGGAAGGA AGGAGGTGCT TGGCTCTCTC CCGGGCCGCC ACCTTCGCCG TCCTCGCCAT CGGTCTCATC 000400
000401 GTCAGTTTCC TCGTCATCGT TGTCACCTCG GTCGTCAGGG GCCGCGGACA GTGAGGGGTA GGCACCAAGC CCCTCGGCTT 000480
000481 TGGCAGGTGT CGGGGGCGCA GGCAGCTGCA AACTCGCGGG CCGGCGCTGC TTACCGCTGT GCGCGGCACC GGGGTGCCCC 000560
000561 GGGGGTGCGC AGCCAGCAGG TGGCGCAGGC GGTGACGCAG CTGCTCAGGT GCGAGTGGCG GGGGCACAGG GGTGGGCAGG 000640
000641 GGCGCGGGTG CAGAGGTGCT CGCGGGTGCA GAGGAGCGCG TGCGATAATC TGCGTGCATT CGTCGATAAC TGTCTATGCG 000720
000721 AAGCACCGAC GCAGCCATGA GTACCTGCGG GGCTTCACTC TGTGCCACAA CGAGCGAACC GCTGTACAGG AGCTCGACTA 000800
000801 GCTGTCGCAC CGTCTGCACA GGCACCACCG AAGGCACACG GATCTCAGAG GGGCCGAGCA GCAGCTTGTC TTGGAAGGAG 000880
000881 GGCGAGCCGA TTGCCAGCCC GCAGCGGTGC GCACGCAGCG AAGCTTCATG AATGCACACA GTCACGTCGC AGAAGTGCCC 000960
000961 ACCCAGCTTC TGCCCATTGA GGGTCTCAAG CAGAGAGCGT GAGAAGTTCT GCAGATGTAT GTGGCGCACA GCCTCTACAG 001040
001041 CCGCCGACTC CGACTCCTCT TCAGGCACCA GGCCTGGCCG TGGCCGCCTT CTCACCGACT CCAAGGCAGC ACTTCCGGGC 001120
001121 GCTTCTCTTT Atttttatac agttttattg agatataatt tacatgctat ccagcccatc tatttcaagt gtaccatgca 001200
001201 aggggtttgt atatattcac agagttgtgt atccatcacc atcgttttag aacattcatc actccagaag aaactacgta 001280
001281 cccatcagca gccactgccc atttccctga tctgccccgc cctaggaaat ccgtaatcac tttcagtcta tggatttgcc 001360
001361 tattctagac cattcatata aatgaagtca cacaacactg ggtcttatgt gactggcttc tatcaaagtt tgcaaggttc 001440
001441 atttatgttc atgGGCTGAC CCCACATTGG ACACCGCTGC ATCCATGTCC ATCACACAAC ACAGCTGCCG TTTCTTCTGC 001520
001521 CTGCTTATGG GAAAGTCCCC TCTTCTCCTC CGTTTTCTTC TCTTCCTGCC CTATCACACC GTGCACTTCT CCCTTTCCTT 001600
001601 AAAGAACCAC CATCAACTTT AGGAGGAGGG AAAGGGGTGG CTCTGGCAGG AAAAGCCAGA ATCCCCTCTA GCCAGCAGAG 001680
001681 AGAGAGAGGA ATGGCTGCAT GTTTTCTCCC CCAGTCCAAG GCACTGGGTC TTGGCTGGGT TGAAGGTTCC AAGCTGCTCT 001760
001761 CCTGCTGTGT CGGTGAGTTC TGGTCAACCT GCAACCTCCT GATATGGCCA TTGCAGTTCA TCGAGTCTTC AGGGACTCCC 001840
001841 CATGGCCTGG AGTACTTTGC CTTGCTTACA CGGGAGAGGA GAATGGATTT ATAGAGAACA TCATCTAAAT CCAACTTGAC 001920
001921 CATTGTGTGG CCACACTTGC TAGATTGCTA TAGTCTAAAT CTAGCATTgt agaaagacgg gggagcttgg agctgcacaa 002000
002001 acccaggtct ggaactggct ccttaccttg gaaggtgaat gatcctgcca ggactcttag cctccctggg tctcaatttc 002080
002081 tttatctgtt tcatgggaat gaggatctct gctgggtggt tgGGTGATGT GGGGGCTGTG TGAAAACAGC TTGTCAATAC 002160
002161 AAGCCAAAAT AGAAATATTT CTCCACAGAG TATGAAGGTC AAATGAGAGA ATACATTTAA ATTAAATGGA AAATTAAAAT 002240
002241 GGTAAAAAAT GCAAAGCTGT ATTGAAAGTT CCGAGCTTCT CTATAAGGAG CTTTTTGACT ATGGAAGAAT CCTGTACTCG 002320
002321 TTCCCCCTAA ATAT
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Predicted Small Protein

Name NONHSAT073162_smProtein_1484:1621
Length 46
Molecular weight 5356.407
Aromaticity 0.133333333333
Instability index 42.7044444444
Isoelectric point 9.84637451172
Runs 7
Runs residual 0.00669191919192
Runs probability 0.0800085800086
Amino acid sequence MSITQHSCRFFCLLMGKSPLLLRFLLFLPYHTVHFSLSLKNHHQL
Secondary structure LLLLHHHHHHHHHHLLLLHHHHHHHHHLLLLLEEEEELLLLLLLL
PRMN LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
PiMo oooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiii