NONHSAT073810
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT073810 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1661 nt |
Genomic location |
chr2-:114356605..114359153 |
Exon number |
3 |
Exons |
114356605..114357791,114358295..114358403,114358789..114359153 |
Genome context |
|
Sequence |
000001 CTTTTTGTTA ACTTGCCGTC AGCCTTTTCT TTGACCTCTT CTTTCTGTTC ATGTGTATTT GCTGTCTCTT AGCCCAGACT 000080
000081 TCCCGTGTCC TTTCCACCGG TCCTTTGAGA GGTCACAGGG TCTTGATGCT GTGGTCTTGA TCTGCAGGTG TCTGACTTCC 000160 000161 AGCAACTGCT GGCCTGTGCC AGGGTGCAAG CTGAGCACTG GAGTGGAGTT TTCCTGTGGA GAGGAGCCAT GCCTAGAGTG 000240 000241 GGATGGGCCA TTGTTCATCT TCTGGCCCCT GTTGTCTGCA TGTAACTTAA TACCACAACC AGGCATAGGG GAAAGATTGG 000320 000321 AGGAAAGATG AGTGAGAGCA TCAACTTCTC TGACAACCTA GGCCAGTGTG TGGTGATGCC AGGCATGCCC TTCCCTAGCA 000400 000401 TCAGGTCTCC AGAGCTGCAG AAGACGACGG CCGACTTGGA TCACACTCTT GTGAGTGTCC CCAGTGTTGC AGAGGGCCAT 000480 000481 CAGGCACCAA AGGGATTCTG CCAGCATAGT GCTCCTGGAC CAGTGATACA CCCGGCACCC TGTCCTGGAC AAGCTGTTGG 000560 000561 CCTGGATCTG AGCCCTCGTG GAGGTCAAAG CCACCTTTGG TTCTGCCATT GCTGCTGTGT GGAAGTTCAC TCCTGCCTTT 000640 000641 TCCTTTCCCT AGAGCCTCCA CCACCCCGAG ATCACATTTC TCACTGCCTT TTGTCTGCCC AGTTTCACTA GAAGTAGGCC 000720 000721 TCATCCTGAC AGGCAGCTGC ACCACTGCCT GGCGCTGTGC CCTTCCTTTG CTCTGCCCGC TGGAGACGGT GTTTGTCATG 000800 000801 GGCCTGGTCT GCAGGGATCC TGCTACAAAG GTGAAACCCA GGAGAGTGTG GAGTCCAGAG TGTTGCCAGG ACCCAGGCAC 000880 000881 AGGCATTAGT GCCCGTTGGA GAAAACGGGA ATCCCAAAGA AATGGTGGGT CCTGGCCATC CGTGAGATCT TCCCAGGGCA 000960 000961 GCTCCCCTCT GTGGAACCCA ATCTGTCTTC CATCCTGTGT GGCCGAGGGC CAGGCTTCTC ACTAGGCCTC TGCAGGAGGC 001040 001041 TGCCATTTGT CCTGCCCACC TTCTTAGAAG CGAGACGGAG CAGACCCATC TGCTACTGCC CTTTCTATAA TAACTAAAGT 001120 001121 TAGCTGCCCT GGACTATTCA CCCCCTAGTC TCAATTTAAA AAGATCCCCA TGGCCACAGG GCCCCTGCCT GGGGGCTTGT 001200 001201 CACCTCCCCC ACCTTCTTCC TGAGTCACTC CTGCAGCCTT GCTCCCTAAC CTGCCCCACA GCCTTGCCTG GATGTCTATC 001280 001281 TCCCTGGCTT GGTGCCAGTT CCTCCAAGTC GATGGCACCT CCCTCCCTCT CAACCACTTG AGCAAACTCC AAGACATCTT 001360 001361 CTACCCCAAC ACCAGCAATT GTGCCAAGGG CCATTAGGCT CTCAGCATGA CTATTTTTAG AGACCCCGTG TCTGTCACTG 001440 001441 AAACCTTTTT TGTGGGAGAC TATTCCTCCC ATCTGCAACA GCTGCCCCTG CTAACTGCCC TTCTCTCCTC CCTCTCATCC 001520 001521 CAGAGAAACA GGTCAGCTGG GAGCTTCTGC CCCCACTGCC TAGGGACCAA CAGGGGCAGG AGGCAGTCAC TGACCCCGAG 001600 001601 ACGTTTGCAT CCTGCACAGC TAGAGGTCCT TTATTAAAAG CACACTGTTG GTTTCTGCTC A |
Predicted Small Protein
Name | NONHSAT073810_smProtein_1406:1636 |
Length | 77 |
Molecular weight | 8560.6803 |
Aromaticity | 0.0789473684211 |
Instability index | 66.2565789474 |
Isoelectric point | 10.0609741211 |
Runs | 9 |
Runs residual | 0.0229885057471 |
Runs probability | 0.034838760329 |
Amino acid sequence | MTIFRDPVSVTETFFVGDYSSHLQQLPLLTALLSSLSSQRNRSAGSFCPHCLGTNRGRRQ SLTPRRLHPAQLEVLY |
Secondary structure | LEEEELLLEEEEEEEEELLLHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |