NONHSAT073924
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT073924 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1387 nt |
Genomic location |
chr2+:118771804..118773190 |
Exon number |
1 |
Exons |
118771804..118773190 |
Genome context |
|
Sequence |
000001 TGGGCTGCAG GTCCTGGCGT TGTGCTGGAT CATCGCGCCC GTACTCTGAA GTTTTCTCCG TGGCGCTCTT TGAGAGGGGT 000080
000081 TCCTCCTGCA TCTTGAGAAT ATTTTGCATT TCGGCTCCCT TCTCTTCTCG CTGCCATCGG ATGCCCCAAA TAGGTCCTGT 000160 000161 CCCCTCGGTG AATCAGACTT CGGAAACCGC CTCGCTTCAG GGTCAGAGTC CAAGTACAGA TGAGCTTGAG GATTCTGAAT 000240 000241 GCACGCCCGG CTCTAGACCT TACAGACACA CGCTTGGACA GACTTCTCCA TATACGACCC AGGAACGGAC CCCTTGAGAA 000320 000321 GGGATTCTTC AAGCCCGCTG CCCTCTCCAG CGTCCTGGCC AGTGGCATCG CGTTCCCAGG AAACCTCGCT TCAGATATTG 000400 000401 CCCACCACCC CGCCCTATTC ACGGTTCCTG GGTCTTCCTG GAGGAATGAC ATCTCAGAGA ATGCGGACTC CTATGTTCAT 000480 000481 GTCATTTGAG CCGCCGCGTC CCTTATTTGA TGTACCCCTT GTTGGTCCCG GAGGATGGCA ACTAGACAAA AGGTCACAGG 000560 000561 CCCCCACACC CGCTCCATAA CGGCTTCTTG GCTTTTTGTT TCTTTTAAGC AATGAGGAAA GAGATGACTT TCGTGAAAAC 000640 000641 TTTTGCTGGA GAAGAGATCC TTCCCTCTGT ATATGTGTGT GGGATGGGAA GTGTCAGACT CAGACCTTTA GTTCCTTGAG 000720 000721 ATCAAAAAGG TTTCGTGTTT GCTTTCGTCT CTTCTTTGCA TCCCTAGCGT CTTTAAAAGA GTAGGcaggc gcggtggcac 000800 000801 atgcctgtaa tcccagcact ttgggggtcg aggcgggagt atcacttgaa cctaggagtt ggagaccaac ctgggcaaca 000880 000881 tagtgagacc tccatctcta caaaaaataa gaaaattagc ccggtgccag tggtcccagc tagccggtag gctgaggtgg 000960 000961 gagaattgct tgagccagga aggttgaggt tgcagtgagc tatgataaca ccactgcact cctgcttggg tgacagagca 001040 001041 agaccctgtc taaaaaCtat atatatatac gtgtatatat atatatgtgt gtatatatat atacgtgtat atatgtgtgt 001120 001121 atatatatac gtgtatatat atatGATGTT TTCTATTTTA TTTTATTTTT GCACCTTTTG TACTCCTCCT GGAGTTCATC 001200 001201 CTGACAGACA GAGGTTTGTC TGGAGCCAGA GCTCACAAAT AGTTGGAACT GCCCTAAGGA TGCCATTTTG TTCTTAAATA 001280 001281 TAACTAGCAA ATATTACTCA AAGCTGTGCA CGATCCCCAA ACCCTGGTCC CCAATAATTT GAATAATCTG AATATGCAAG 001360 001361 TTAAGGTATT GAGATGGGAA CCCTCCT |
Predicted Small Protein
Name | NONHSAT073924_smProtein_1001:1276 |
Length | 92 |
Molecular weight | 10905.008 |
Aromaticity | 0.208791208791 |
Instability index | 54.6924175824 |
Isoelectric point | 8.89251708984 |
Runs | 8 |
Runs residual | 0.0455586080586 |
Runs probability | 0.0796568627451 |
Amino acid sequence | MITPLHSCLGDRARPCLKTIYIYVYIYICVYIYIRVYMCVYIYVYIYMMFSILFYFCTFC TPPGVHPDRQRFVWSQSSQIVGTALRMPFCS |
Secondary structure | LLLLLLLLLLLLLLLLLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEHHHHHHHHHLLLLL LLLLLLLLLLEEEEELLLLEEEEEEELLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHH HHHLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTT TTTiiiiiiiiiiiiiiiiiiiiiiiiiiii |