NONHSAT074129
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT074129 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1643 nt |
Genomic location |
chr2+:127069791..127086709 |
Exon number |
2 |
Exons |
127069791..127071117,127086394..127086709 |
Genome context |
|
Sequence |
000001 AGGGTACATG GGGACCATTG CTTTACATTT GCCTGGCAGC ATTTCTCTTT CCACTTCTAA TATTAGACCC CTCCTTTCTG 000080
000081 ATCCTAGGCA TGGCCCATGT CCCTGGGAAC AGTAGAGACT GAGGCCTGGG TCTCAGTGGC ATCAATTAGA GCCTTTCCCT 000160 000161 GGGACTGATG TACGAGTGTC TCTTTCTGTT GGCATCTTTA AATGAGAAGA TAAAAATCCA GGTTATCATT AGCCACATTC 000240 000241 ACTGGTCAAG AAAAAGGCCT CTGCAGAACA CAGCTGAGCA GAACCACACA GAAGTGGAAG AAGCAAAGAG GTTTCCAGAA 000320 000321 GACTGTGAGT ACTTGATTCC AATCTCTGAG CTTCTATTTC AGGCAGTTCT TCCTTTGATC CTTCCCAAGT TCTATAAATA 000400 000401 GAAATTTCCA CTTTTGCTTG TGTTAATGAA TTGCTCTTTA TCATGCGTAA TAGAGTTCTG ACGAATATAC CTGATTATTC 000480 000481 ATCTGTGTGT CTTTCAGCGT TGCTCGACAG GATagcagca tcagccttgc ctgagaattt actagacatc caattcccag 000560 000561 gcccatccac agacccactC AGCTCAGGGT AGACACACAT ACACACACAC CCCTCTATAC AAATGCAAAC TCAGGGTAGG 000640 000641 ACCTGAGATT CTGCATTTGA ACTTGTCTTT CAGGAGTTCT TATGCATGCT AATGTTTGCG AAGAACTCAA CTAGTTTATA 000720 000721 AAATAAGAGA GATCCAACCA CAACAATCAG CCTGTccaac tagtttgcca attccataga gacgttccat ctcttattca 000800 000801 gtcttatatt caccacctag aaagtgccta gcacacaAAT TGGTATTGGA GCATATTGAA CAAGAAACAC AAAGGCAGAG 000880 000881 AAAGCAAGGT AGGATGGCAA AACTCCTGCA TTCAGCATAG AATCAGGTTA AGCAAGGTGT TTGGGGACAT GGATCTGGGG 000960 000961 ATGAAAGGCC TAGAGCTGAG ACTTTGGGAT TGGAGACTGG GAAATGACAC AGAATAAGAA CAGGAACTCT GGGCAAGTTC 001040 001041 ACAGGCTTTG AGACTCACGA GTATGGAATC CAGCCCGTCA TCTTTCTCCT TGGAAGTGTG TTATTAACAC ATTTTTCCTC 001120 001121 ATTAAAAGGT AGACAAACAA GAGAAACCTC TTTCTATAGC CACAATTTCT CCATTGGCTC TCAACGCCTG CCCTGGGACC 001200 001201 ATCTTCACTG CTACCCTGGT TGGACTCATC CCTGCACCCA CCACATACAC ACGGTAGCAA AAGCACCGCA TATCAAATTC 001280 001281 CCTTTGCCAG ATAAATGGGG TCTCTAGTCT GTACACGGAC CTAAAAGAGG ATGGTCGGCA GAGAGTATCC GAATTATTGC 001360 001361 TCCATGCTGC GAGATCCCTG TTCCTAGGAA AGCCGAGGTC TGCCTTCCAA TGTGCAATTC TAGCTTAATA GGGAAGTTAT 001440 001441 ATCACTGTTG ACAGTCTTGT CCTTTCTTAA TAAATCTTAG GAGTTATCCC ATAAGGAATA TTCATTTTCC TTCAGACATG 001520 001521 AAGTGACCAT TAAGATGCGC CAGTAAAGAA TCCATGGCTT TCAGTGTCTG GCCCTATTTC TTCTAGTTCA AGAATTTTAA 001600 001601 GAAAAAATAT TGCAATAAAA GGTATATTTT TATTAGCTAC AAA |
Predicted Small Protein
Name | NONHSAT074129_smProtein_167:400 |
Length | 78 |
Molecular weight | 9168.6606 |
Aromaticity | 0.103896103896 |
Instability index | 68.8053246753 |
Isoelectric point | 6.26849365234 |
Runs | 13 |
Runs residual | 0.0327498588368 |
Runs probability | 0.0418382183089 |
Amino acid sequence | MYECLFLLASLNEKIKIQVIISHIHWSRKRPLQNTAEQNHTEVEEAKRFPEDCEYLIPIS ELLFQAVLPLILPKFYK |
Secondary structure | LHHHHHHHHHHHHHHLEEEEELLLLLLLLLLLLLHHHHLLHHHHHHHHLLHHHHHLLLHH HHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |