NONHSAT074296
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT074296 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1542 nt |
Genomic location |
chr2+:131031481..131033022 |
Exon number |
1 |
Exons |
131031481..131033022 |
Genome context |
|
Sequence |
000001 ATGTTCACCA ACTGTTGACT GTTCTCAGCC AACTATAAAG ATACCGGGAT ATTCTATCTA CTATTCAGTG CATGAGCAGG 000080
000081 GATAGTGGGT CCAGATTTAA GCCTCCTTAT TCAAGCTGAA CTGGGCCAAC CAGGTACTCT TTTAGGAGAT GATCAAATTT 000160 000161 ATAATGTCAT CATTACAGCT CATGCATTTG TCATAATTTT CTTTATAGTA ATGCCAATTA TAATTGGAGG CTTCGGCAAC 000240 000241 TGATTAGTTC CTCTGATAAT TGCCCCCCCA ATATAGCATT TCCCTGCATA AATAGTAGGA GTTTCCGACT CCTCTCACCC 000320 000321 TCTTTCCTAC TATTATTTGC ATCCGCTATA GTAGAGGCAG GCGCTGGAAC CGGCTGAACA GTCTACCCCC ACCCCCCCAC 000400 000401 CCCTTAGCAG GAAATCTAAC ACATGCGGGA GCCTCTGTAG ATTTAACCAT CTTTTCACTC CATTTGGCAG GTGTTTCTTC 000480 000481 TATTTTAGGG CTATTAACTT TATTACCACA ATTATTAATA TAAACCCCCA GCCATGTCCC AATATCACAC ACTCCTCTTC 000560 000561 ATCTGATCAG TCTTAATTAC AGCAGTTCTT CTACTCCTTT CTCTCCCAGT CCTAGCTGCT GGCATTACTA TATTGTTAAC 000640 000641 TGACCGCAAT CTTAATACTA CTTTTTTTCG ACCCAGCTAG TGGAGGTGAT CCTATCTTAT ATCAGCATTT ATTCTGATTC 000720 000721 TTCGGTCACC CCGAAGTCTC TCTCATCTTA CCAGGCTTCG GATAATTTCC CATATCATAA CATATTATTC TGGAAAAAAA 000800 000801 AAGAACCATT TGGGTATATG GGCATAGTAT GAGCCATAAT ATCAATTGGC TTCTTAGGGT TTATCGTATG GGCCCACCAC 000880 000881 ATATTTACAG TAGGAATAGA TGTAGATACA TGAGCATATT TCACCTCTGC TACTATAATT ATTGCTATTC CTACTGGTGT 000960 000961 CAAAGTCTTT AGCTGGCTAG CTACACTTCA CAGCAGTAGT ATCAAATGAT CCCCCACAAT GCTCTGAGCC CTGGGATTTA 001040 001041 TTTTCCTTTT TACAACAGGA GGCCTAACCG GCATCGTACT AGCCAATTCA TCACTGGATA TTGTACTACA TGATATTATG 001120 001121 CTGTAGCCCA TTTCCATTAT GTCTTATCAA AAGGAGCCAT ATTTGCCATT ATGGGAGGCT TTGTTCACTG ATTCCCTCTA 001200 001201 TTTTCAGGTT ATACTCAATC AAATCTATGC TAAAACTCAC TTTGCTATTA TATTTGTAAG TGCGAATTTA ACTTTTTTCC 001280 001281 CACAACACTT CTTCGGCCTA TCTGGTATGC CTTGACGTTA CTCCAGTTAT CCTGACGTGT ACACTGCATG AAATATTATT 001360 001361 TCATCCTAGG CTCATTTATT TCCCTAACAG CAGTAATACT AATAATTTTC ATGGTCTGAG AAGCCTTCAC TTCAAAATGA 001440 001441 AAAGTTCTAA TAGTTGAGCA ACCATCTACC CACTTAGAAT GACTATATGG CTGTCCACCA ACCCATCACA CATTCGAAGA 001520 001521 ACCAACCTAC ATGAAGACCT AA |
Predicted Small Protein
Name | NONHSAT074296_smProtein_1109:1258 |
Length | 50 |
Molecular weight | 5716.143 |
Aromaticity | 0.102040816327 |
Instability index | 69.3734693878 |
Isoelectric point | 9.44696044922 |
Runs | 9 |
Runs residual | 0.0216216216216 |
Runs probability | 0.0189895778132 |
Amino acid sequence | MILCCSPFPLCLIKRSHICHYGRLCSLIPSIFRLYSIKSMLKLTLLLYL |
Secondary structure | LEEELLLLLLEEELLHHHHHLLHHHHHHHHHHHHHHHHHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTToooooo |