NONHSAT074357
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT074357 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2212 nt |
Genomic location |
chr2-:131294143..131307488 |
Exon number |
3 |
Exons |
131294143..131296043,131301456..131301631,131307337..131307488 |
Genome context |
|
Sequence |
000001 CCACCGGCCT GATGAGGGAA GCAGGGGCAG AGCGCTCAGG CCAGGGCCGG CGGGGGCACT GCGCACTGGC CGCCTCCCTC 000080
000081 CTCTGGCCAA TCCTCCTGCC GCTGCGCGTC TAGTCCACCT CGTCCCTCTC TGCAGTCTTC CTGCCTGAGC CCTTCCAACT 000160 000161 TCAGGAGGCA GAGGTCGGTG TCATGGACAA CACTGTCTGC GGATCCTTTT TCCAGCCCCA GTACCCCGGC CAGCCAAGCA 000240 000241 GCAGTGACTA CACCATCCAC GAGGACATGC TGTGCGCTGG GGACCTCATA ACAGGAAAGG CCATTTGCCG AGCATGTTCC 000320 000321 TACGTGAAGC ATGGAGTTAC GCAATGGCCT GCCTGTCCAT GAAGTTCCTC TGGCCTCCTC CGATTCTGTG GCTGCAAATC 000400 000401 CACACCTAGG AGCTCCGCAG GCCTGCTGGA GCACAGCGCC TGTAGGTTTC TGCGCCTGGA ACCCACCTCA GGACCACAAG 000480 000481 CCGCATTCAG TCTCTTTTTA TAGATCTGGA ACCCGAAGCC CAGCGTGGTT AGGAACTTGT CTAAGGTCAC TTGGTAGTAA 000560 000561 ATACTGGAAC AGGGATTCAA ACCCACATCT CCAGAGAGAG CTCAGAAGCC TTGTGCTTTC CATGAGTGCA GCTGTTTCCA 000640 000641 GAGGCCTCCG GCCCTGTCTC ACCTTCCCAG ACTGCCTTGA GAGGCTCTAG CTGGCCTGTC TCTAGTGTGG CCAGATTCTA 000720 000721 TCTGGTCAGT GGCAAGGGAG GACCCCAGGC CACAATACTG ACATCAGGGA ACAGAACAGA TCTGCAGGGC CAGTGAGTGG 000800 000801 TGCTACGGAA AGGCTGGGAG TGGCCCCTGC GTGGTTTTCC CTAGACCCAT CGTCAGGGGC TCCAGGCCTC CATGTGTTGT 000880 000881 GCTGCACGGG CTACTGGCTC CCTCTCCAAA ATCGACCCTG GGTGAGCTGT GGAGGCGAGA AGGCAGTGTG CATTTCAGAA 000960 000961 ACTAACCAAA ATCAGTGAGA AAATCTTGGA GAAACTGAAG TTACCCTGGG CGGCTGTAGC TGGGAATGGA GGATGGGGCA 001040 001041 GCCAGGAGCC AGACTTAAGA AGGCTGTTCA CACTCTGCTC TTGTTGCTTG CCTCCCACAC CTCGTGACAA ATGCTGCCTG 001120 001121 GTCCCGCTCA GGTGTCAGGA TTGCAAGGTG GCTGTGTCAG CCAGTGTGAG GGCCCCACAA GCCACCGGTG TTGTGTGCCC 001200 001201 TCCATCCTCC TCCTGAACCC CCCCTGGGTG GGACAGTTGC TATCCAGGGA AATGGGCCTC TTCCACTGTG ATCTCCTCCA 001280 001281 GGGCTTTCAC CGGCAGGCCC GCCTGCAGGA GTGGCTTGTG GGGTGGCAGG ATGCAGGAGA GAGTGAGTGA GGTGCTTCGT 001360 001361 GCCTGGGGCC CTCTGCTCTG GGGCCACCCT CCTCGTTGAC TCACTGGGAG CCTTGCTAGT GCAGACAGGG TGACCAGGAG 001440 001441 CTGCTAAGCC CAGGGAATGC ACACACGTGC ACTGGAGCAG CTGCCTATCT TAAGAGTCCA ATGCCCACCG AAACACAGTA 001520 001521 GGCTGCACAG CATCCACTAC TGGAAGTAGA GTTGCTGGAA AAGACAGACC AAACATATTT AATAAGCACA ATAAATATCT 001600 001601 TTTTGGATAC AGAAAAATAT TATTAGTAAT AAGACCTAAG ACAAAGAAAC TACCGAAAAG AACCAAGTCA AAATATTACA 001680 001681 TATGCAAAAT GTAATCGTTG AATTAAAGAC CACATTACAT TGAGCAAACA GGGTCAATGC AGATGAAAGA GGAAGCCAGT 001760 001761 CGTTACTTTA AAGGTATGGC TGTCACAGTG TGGACTTTGG AGCCCGTCCA CTTTAGTTGG GGTAATTTGT AGAGCATTTA 001840 001841 TTTACAAAAG TACTAATCAC CCAGGTATGT TTGGGCTGAA GGCTCCGGGA AAGCCCAGGG CAGGGGCCTG GCACAGGCAT 001920 001921 CAGAAGCAGA GCTCTTGCCA CCCAAGGCCC TGAGGGACCA GTGAAGTAGG AGCCGTGGGG AGAGGGTGCC TGAGAGGAGC 002000 002001 AGGGACACTC AGCCGAGGGA CACAGCCAGC CAAGGCGGCC TCACAAAGAG GATTTTCATG GAAACAAATG CCCTGACTAC 002080 002081 TTCATTCCCA CATCTTCGGC TGAGGCTCCC ATGGCAAGTG GAGAGAGCAG CTGCAGGTGG CCTCGGTCAC TTGGGTCAGC 002160 002161 TCTCCTGCTT AAAACAAACA CAGAAATCAA TAAAAGTGTT GATTGTATTA TT |
Predicted Small Protein
Name | NONHSAT074357_smProtein_182:361 |
Length | 60 |
Molecular weight | 6427.218 |
Aromaticity | 0.101694915254 |
Instability index | 46.2915254237 |
Isoelectric point | 5.29168701172 |
Runs | 10 |
Runs residual | 0.0250349867828 |
Runs probability | 0.0360095389507 |
Amino acid sequence | MDNTVCGSFFQPQYPGQPSSSDYTIHEDMLCAGDLITGKAICRACSYVKHGVTQWPACP |
Secondary structure | LLLEEELLLLLLLLLLLLLLLLLLLHHHHHHLLLLLLHHHHHHHEEEELLLEELLLLLL |
PRMN | - |
PiMo | - |