NONHSAT074433
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT074433 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1225 nt |
Genomic location |
chr2-:132056793..132058017 |
Exon number |
1 |
Exons |
132056793..132058017 |
Genome context |
|
Sequence |
000001 AGTGAATCCA TCCTGCCGTC CGTCTCCACT TTCACCAGCC CGTACCGCAA GCGCCGCCTG CAGGCGCGCT GACCCCGCGC 000080
000081 CCAGCCCGAG GCCAGGGGAA CCCACAACTA CCTCAACAGC GTGTGGGACT CCATTCGGTC CACAGGGCTG GATGGCCTGG 000160 000161 GGCTGAGGCC ACCCCGAAGC CCCCGGCGAC CCCGCCGTCT GCGTCCTATT ACCCGAACAC TGCACTCCGC TGCCCTACGG 000240 000241 CGCCCTGGAG CTGGACCCGC TGCCAGATGG CCCGCGCTGC TCAGCTGgtt gttgttgttg ttgttgttgt tgttgttgtt 000320 000321 gttttgagat ggagtctcct tgggttgccc aggctagagt gcagtggcgc gatctcggct cactgcaagc tccatctcct 000400 000401 gggttcacgc cattctcctg cctcagcctc cggagtagct gggactacag gcgcccgcca ccgcacccgg ctaattggat 000480 000481 tttgtacttt tagtagagac ggggtttcac ctgttagcca ggatgttctc catctcctga cctcgtgatc cgcccgcctc 000560 000561 agccttccaa agtgctggga ctacaggcgt ccgccaccac gcccggcTAC TTTTTTTTTt tttttgtatg tttagtagag 000640 000641 acgcggtttc accctgttag ccaggatggt ctccatctcc tgaccccgtg atcggcccgc cttggtctcc caaagtgctg 000720 000721 ggattacagg cgtgagccac tgcgccctgc cTGCTCAACC GCTTTCAACT GGTGCTGCCC AGCCACCTGG TCAAAGCCCA 000800 000801 GCACCCTGAA GCAGATGGCG GCGGCTACGC ACCCAGGTTC AGGTATGGAT CGCGCGTCCT CTCAAACACT AGGGCGCCCC 000880 000881 GGGCCTGCAG CTTCATGCAT GCGAGGTCCC GGGTCCCTCC CATTCCGCCC CCAACACCTG CCCCTCAGCC CCTACGGCCC 000960 000961 GCACGCCTCC TTCCCGCTGC CCTTCCGTGG CCCTGGTTTG GGACACCCAG CCCGGCCTTC ATGAGGCGCC CCCCGCCCAG 001040 001041 CTCCGCCCCT CCACGCCCGT CTTTAGTCTC TTAGGCGGTG GCCGCCGCCG CCACAGCCCT GGGCCTGGCA CCCCCAGTCG 001120 001121 CCCGCGGCCT CCTTGTGGTG GCACCGGCGT CCCCGCTGGA GCTGCTGGAG GCCAAGCCCA AGCGTGACAG CTGCTCCTGG 001200 001201 CCTGGGAACC GCAACACCAG GCATA |
Predicted Small Protein
Name | NONHSAT074433_smProtein_266:547 |
Length | 94 |
Molecular weight | 9752.386 |
Aromaticity | 0.0322580645161 |
Instability index | 50.8064516129 |
Isoelectric point | 11.1930541992 |
Runs | 12 |
Runs residual | 0.00189167662286 |
Runs probability | 0.0555040334452 |
Amino acid sequence | MARAAQLVVVVVVVVVVVVLRWSLLGLPRLECSGAISAHCKLHLLGSRHSPASASGVAGT TGARHRTRLIGFCTFSRDGVSPVSQDVLHLLTS |
Secondary structure | LLLLLEEEEEEEEEEEEEEEEELLLLLLLEEELHHHHHHHHEEELLLLLLLLLLLLLLLL LLLLLLEEEEEEEEEELLLLLLLLHHHHHHHLL |
PRMN | LLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | iiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooooooooooooooooooooooo ooooooooooooooooooooooooooooooooo |