NONHSAT074648
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT074648 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1269 nt |
Genomic location |
chr2-:138352794..138400447 |
Exon number |
2 |
Exons |
138352794..138353891,138400277..138400447 |
Genome context |
|
Sequence |
000001 AGGATCTGTG ACCTGACCTA TTATAATCAG TGCTTAATGA ATGGCTGTTT ATTACCCTAG CAATATCACT CTGCATGAGG 000080
000081 TTAAGCCATT TGGTTGTATT TTTCCATGTT CTGCATTGCA TTAAAAATAC ATTGTGCCAG ACCCCTGGTG CTGTGAAATT 000160 000161 TATTCCATCA GTTAATCTGA CATTCAAGTC CTGTGTTATC TGCCTCCATT TAACTGAATT CTTACAGTTA GTTAATAGCT 000240 000241 ACATTATCTT CCAGGTAAGG CAGTCTGGGC TCTGTCCCTG GAAGATGTTG TATTATCCAG CATGTGTTCA TGCTTTTTAC 000320 000321 CTGTTTAGTG AGTTTCCATG TTGCCTTCTG TGCTTGCAAG ATGTATGACT TTTACCAGCT GTCCTTCTTA ACCTTTCTGG 000400 000401 CTTACAATAA TCTCATTTTT TTGACCCTAC AATAAGATAT AAAGGCTGAA ATATATTTGA CTATTTTGTA TAGCTCTCTG 000480 000481 TTTTTGCTAC TTGTATTTTG GGGTTTTTTC TTCACTAAGA TTCTGAGTCT TTTAAAGATT AGAACTATGT AATATATATC 000560 000561 TTCAAAAGTA TTGAGCAATT TATGAGCTCC CAAAAATATA CTATTTAATG ATTTGAATTA CAATATTAAA TAGGTATATA 000640 000641 GTTATAACCT TCACTTGAAG TTTGTAATAA TATTATTTTT TAAAGTTTTG TGTGATTAAT AAATCATTCA TGATTGATAT 000720 000721 AAACATATAT GTGTATATAC ATTTATTGAT TCATGTGGAA TGTGTACATA TATCTATACA AGTATATTTT TAAAATGAAA 000800 000801 TTTCTCCCAA TGTACATCCA ACAAAAAGGG ATTAAGTCTA TAAAAGATAG TCCATTTTCT GTTTAAAACT GAAATTTTAG 000880 000881 TATTTCCAAT ACCAAGCCAA CATAGTAAAT CTCAAATTAA ACTTTCTTGG ATTCATATTT GAATTCAAGA ATTGTGCACA 000960 000961 AAAGACAAAT AAAGTGTTAG AAACCAGAAA GCATTTTATG TGTTACCTCA CCCCTTTGAA AGTATTTATC CCTGGGTTGT 001040 001041 TTGAACATGT CTGGCTTTAG GGCTGCCTAA TTAGCCACGT GCTATAAATA TGATAGAAAG CATGTCAAGG CTTATGAAAC 001120 001121 CCACCACAAC AAGTTACCCA TATTACTGCC AATGAGAAGA TGTGGTATAT AAAGAAGAAA CTTTGACAGA CTGAAAAATA 001200 001201 AAAGGAGCAG GTATAGCATT TTCATATCTT CTTGTAATTA AATACTGTCA CTTTGGAATA GATAGAGGA |
Predicted Small Protein
Name | NONHSAT074648_smProtein_74:367 |
Length | 98 |
Molecular weight | 11233.4403 |
Aromaticity | 0.144329896907 |
Instability index | 51.6887628866 |
Isoelectric point | 8.41375732422 |
Runs | 16 |
Runs residual | 0.0334096983582 |
Runs probability | 0.0841613672496 |
Amino acid sequence | MRLSHLVVFFHVLHCIKNTLCQTPGAVKFIPSVNLTFKSCVICLHLTEFLQLVNSYIIFQ VRQSGLCPWKMLYYPACVHAFYLFSEFPCCLLCLQDV |
Secondary structure | LLLLEEEEEEEEEHHHHLLLLLLLLLEEEEEEELLLLLEEEEHHHHHHHHHHHHHHEEEE ELLLLLLLLEEEEELLEEEEEEELLLLLEEEEEELLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLL LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTiiiii iiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooo |