NONHSAT075228

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT075228

Source

NONCODE4.0

Same with

,

Classification

sense

Length

562 nt

Genomic location

chr2-:165578327..165579001

Exon number

2

Exons

165578327..165578821,165578935..165579001

Genome context

Sequence
000001 TATGAAGGAG AAAGAAAATA AAGGGTTTTT CAGTTTTTTT CAACGCAGTA AGAAAAAGCG AGACCAAACT GCAAGTGCCC 000080
000081 CTGCAACCCC TCTAGTAAAT AAGCACCGCC CAACTTTTAC AAGGTCCAAT ACCATTTCCA AACCATATAT TTCCAACACC 000160
000161 CTGCCGTCGG ATGCACCCAA GAAGAGGCGG GCTCCACTGC CCCCGATGCC AGCATCTCAG AGTGTCCCCC AAGACCTTGC 000240
000241 ACACATCCAG GAGAGGCCTG CTTCTTGTAT AGTGAAATCC ATGAGCGTGG ATGAGACAGA TAAGGTGTGT AGTTTTGTTT 000320
000321 TCTATTTTGT TTTTTTGGAT GAGGCAGTGT ACCATTTATT TTTCCTCTTA CCTAACATCT TTTCTAGGTA GACTAGTAAG 000400
000401 AAGTAGTCCT ATAACAGTTG GTAATTAGTA ACAGTTACTA ATATGTAATA AGATGAATAG CTCATTCTAA GATTGGTACT 000480
000481 AGGAATAGAT CTTCTATGTA CATACAGGTC TGTGATGCAG TAAAGGATAA ATGTCCATTT TAAGTAACTT TCATATTCAA 000560
000561 GC
[back to top]

Predicted Small Protein

Name NONHSAT075228_smProtein_290:427
Length 46
Molecular weight 5338.3436
Aromaticity 0.177777777778
Instability index 52.7377777778
Isoelectric point 10.8065795898
Runs 6
Runs residual 0.0289141414141
Runs probability 0.0120414532179
Amino acid sequence MRQIRCVVLFSILFFWMRQCTIYFSSYLTSFLGRLVRSSPITVGN
Secondary structure LLEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLEELL
PRMN LLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiTTTTTTTTTTTTTTTTTTTToooooooooooooooo